XLOC_011381



Basic Information


Item Value
gene id XLOC_011381
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 21089774 ~ 21090112 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024467
TTATGAGCTGCTTGTTTCTTGAAGGACATTCTGCTGATTATAATTTCGTTCAAATATATGGACCATGAAAGATACATCAAAACATGAAGAAATTCAAATATTTGGTGTGACATTTAGAAGACATTTCAAAATTACCATTACAAAGTttattaaaagacattaaaagGTATTAATTACGAATGTATTATTGATTAGAAGTGACAGTTAAGACTTTTTTGGCAGCTAGTCGGCTTATTACAGTCAttcctgaaggatcatgtgacactcaaGTTAAACTTGAGTAAAATATTTagctttgccatcacaggaagaaatatatatatatatttttaaaagtgt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024467 True 339 lncRNA 0.29 1 21089774 21090112

Neighbor


gene id symbol gene type direction distance location
XLOC_011380 NA coding upstream 103398 20979252 ~ 20986376 (+)
XLOC_011379 NA coding upstream 148943 20938254 ~ 20940831 (+)
XLOC_011378 cdk1 coding upstream 160313 20923691 ~ 20929461 (+)
XLOC_011377 NA coding upstream 221238 20868310 ~ 20868536 (+)
XLOC_011376 NA coding upstream 363879 20717976 ~ 20725895 (+)
XLOC_011382 entpd6 coding downstream 12189 21102301 ~ 21123575 (+)
XLOC_011383 pygb coding downstream 36383 21126495 ~ 21152173 (+)
XLOC_011384 eno4 coding downstream 205020 21295132 ~ 21311413 (+)
XLOC_011385 pla2g4f.1 coding downstream 362146 21452258 ~ 21467430 (+)
XLOC_011386 pla2g4f.2 coding downstream 387780 21477892 ~ 21494295 (+)
XLOC_011370 NA non-coding upstream 652476 20251461 ~ 20437298 (+)
XLOC_011388 BX927351.1 non-coding downstream 474495 21564607 ~ 21607709 (+)
XLOC_011389 NA non-coding downstream 577685 21667797 ~ 21703491 (+)
XLOC_011392 AL773596.1 non-coding downstream 827336 21917448 ~ 21917564 (+)
XLOC_011395 NA non-coding downstream 979820 22069932 ~ 22071151 (+)
XLOC_011400 BX511245.1 non-coding downstream 1468943 22559055 ~ 22572656 (+)

Expression



Co-expression Network