XLOC_011390 (ikzf5)


Basic Information

Item Value
gene id XLOC_011390
gene name ikzf5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 21760032 ~ 21822840 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022680
TGTATCTGACACACACTTTTAAAATCAATGCTTCATATATGTAACTTTTTTTAACAGATGCATTAACGAGTGAATTTAGGGAATCTTCACATCTGCAAGACGCTGCACATAAGACTGAGGAAAGTTCTGACTGAAGTGCACGGAGATCAGTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAGCACCCAGCAGTAGACATGTCCTTAGAGGACAGTTCAGGGATGTTGGTGGATGGCTTTGAGAGGACATATGATGGAAAACTCAAGTGCCGCTACTGCAACTATGCCACCAGGGGGACTGCACGACTTATTGAACACATACGCATACACACAGGTGAAAAACCACACAGATGCCACCTGTGTCCTTTCGCCTCGGCCTACGAGCGCCATCTAGAGGCTCACATGCGCTCTCACACAGGTGAGAAACCCTACAAGTGTGAGCTGTGCTCCTTCCGCTGTAGCGATCGCAGTAACCTTTCCCACCACCGTCGTCGTAGACATAAACTCCTCCCAATGAAGGGCGCCCGCTCTGCTCTTTCCCATCGGAAGATGCTCAGCGTCCTGCAGAAGAGAGGAAACTCTTTAGGTTATGGCCGCCGACTGCTCATCAACCTCAGCCCGCCATCCATGGTCTTGCAAAAGCCCAGCTCTGAGCAGCACCACCTGGGGGACTTCACTCACGACCTCCCTCCTCACGCTCACCTTCATCAGGAAGCTTATAACGGTCTAGGAAAGGATCCACAAGCAATCGGTGGAGCAATCGGAAGTGGTTCTAGAGAAGACCAGGATATGGCATTAGACAACCCACTGAACCAGCTTTCAACATTAGCCGGACAGTTAGCCAGCATCCCATCTGAAGCTGAAGGTGCGCCTGTGTCTCCCGGAGCTGAATCGCTACCTGATGAAAAACCTACATTCCTCGTCCAGCAGCCTGTAACAGCGCCCGCTGCGGTTTCGGTCAACACAGCTCAAGCTTCTTCTCCCATCACCCCAGAGCCCAGACCAGCTGCACACAGCGGCTGCAGTCCAGGTGTGGGACCCTGCAGCGAGAGGACCAGCACTCCGAGCGGAACCAACAGCCAGCCAGGGACGCCCACTCCAGTACAGGACCCCCAGATGCTCCATCACTGCCCACATTGTCACATATATTTCCCAGATAACATCCTCTATACCATTCACATGGGCTGCCATGGCTATGAGAACCCTTTTCAGTGTAACATATGCGGGCACAGGTGCAGAAACAGTTATGACTTTGCCTGTCACTTCGCAAGAGGGCAGCACAAATAAGGACACACACTAGGGTTTTACCGGCCTCCTCTTTGCCCTGTTTTACATAATAATGCGATTTTAGTATCAGGAACATTCCAAAGACAAATTCGGGTGAGCCTGCGTTGTTCTTATTTTATTTGAACTCTTATTGGCATGTTATTTGTCTTTGTAAAGGTTGTAAATGGTGTCCTCCTCACATTAAAAACTATCAATATAGATTATCCGACTTTTGCAGTCATGCAGATTTTTTGCCTCAACTCTCTTTTATAAGTGCCAGAGTTTGATAATCAGTGCCTACAGTTATTTTCTGAAAGTTAACACTTcaaattttgtattttcttttgcttttttacaTTTGGACTTCTGAATGACTGTAAATGTTCTCATGTTTTAGTCGTGACATGACCTTCGCCACATTTAACACTTTTCCTCTTCTCTAATTAcggattaaattattatttgcttTGTGCCTCATTATTTAAACTTAACTTAATTCAGCAAGATTGTGATTGAAGATGAACATTTCTAGCAGAGGTAAGTACGTTGGCTGTTTAGCAGTAAAAAAAACGTGTCCTGTAGGATTGTTGTTCAAGATTTTACTGTAGTGGCCTAAGGTCTTCTTCTCCATACTTAGCACCATAGCACATGGCTGTATACACTGGTTTTGTAAAGCAGTGTTGATGATTGTGTTCGGACGGTGTAAGCGCACGgttctctttctttctgtcattCTCTCTCCCTCATCGCTACCATCAGTGCCATGCTGTAGAtgttatttgtaatgtttttggaAACATTTGTGGTGCTACTACTATTGAAGCGTTTCATATTCCTGTCTGCATAATGAACTAAATTATCAGATAAGTATTGTATGTTTTGGTGGATTTGATGTTGAATGTCAATAAACCTGACTTATGCGATGTGTACTGGAATGATAGCTTgtcctgtctttttttttttttttgctcaaaattcAACGATTTCCCTTACATTTGTCTAGTAAACATCATGACATACTTATTACACTTTCTGCAAATGTTCTTCTGTAACCTCATTACATACTTTGAGAATAATACCAGAGATaaatcaggggcctgtttcagtaaggaggttcaaacaactcagagttcaaacttgaactctgagttgatttaccgagagattaaaaactcagagttttcggtttcagaacagctgatctgagttgggtcaatcaacttcgagtagaccaactcagagttaagcgcgcacaccgtgactttaaaaaggcattatcaatggagcgcaggcattacgagtgactatggcaatatgttataaaagagatcaccatttctttctccagctgaacttgatgttctcatgcaaagttatagcaaatatgagtgtatatatttgaaaagaagcaaccatcagtgaagaggagacagttagcgtgggaaaacagctgctcaagttaatgcctaatttcactttttaagtatttaaatatttaagtataataaaataagtaatgtaatttgtgacgtttatatttttttctaaactttttttatacatttattagttttaaa
>TCONS_00022681
AATCTCCACCTTTAAATACAAGCCTTTTGTACAGCTGTTTTTTCATCAAAACGTTGTCCTTTCGTCGACCGCGTCATTTACAAGACTAGCAAGATGGAAACTGATAGAGCATCAGATAAGTTTATAACTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAG
>TCONS_00022682
AATCATTTTAGCGGCGCACCGCCAGATTGAACTTTCACCCCTacgttttcttttgttttgatggCGCAGAGCATCATTTTGGCCCTCCAAAGATTGTTTTTGCACTTCATTCGCCAATGACACAGTCCAAAAAGACAAAAGGAGCATGTTTAAAAGACGTCAGTCCAGCTGCCGCTCAAATGTAAAGCTCGTTTAAATCCCGTTTTAATTGATCCAGTCGCGCTAACTCGCTGACGTTAGCTGTCCAGCATCACCATGGAGCTTTTCTCGGTCAGATTTTTCTAAAAACTCCTTAAATAAGGGGTTCGTCAGTCAACAAATCCAGCAACCGAGTGTGGTTTTAATTCAGCTGACACCCTTGAAAAGTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAGCACCCAGCAGTAGACATGTCCTTAGAGGACAGTTCAGGGATGTTGGTGGATGGCTTTGAGAGGACATATGATGGAAAACTCAAGTGCCGCTACTGCAACTATGCCACCAGGGGGACTGCACGACTTATTGAACACATACGCATACACACAGGTGAAAAACCACACAGATGCCACCTGTGTCCTTTCGCCTCGGCCTACGAGCGCCATCTAGAGGCTCACATGCGCTCTCACACAGGTGAGAAACCCTACAAGTGTGAGCTGTGCTCCTTCCGCTGTAGCGATCGCAGTAACCTTTCCCACCACCGTCGTCGTAGACATAAACTCCTCCCAATGAAGGGCGCCCGCTCTGCTCTTTCCCATCGGAAGATGCTCAGCGTCCTGCAGAAGAGAGGAAACTCTTTAGGTTATGGCCGCCGACTGCTCATCAACCTCAGCCCGCCATCCATGGTCTTGCAAAAGCCCAGCTCTGAGCAGCACCACCTGGGGGACTTCACTCACGACCTCCCTCCTCACGCTCACCTTCATCAGGAAGCTTATAACGGTCTAGGAAAGGATCCACAAGCAATCGGTGGAGCAATCGGAAGTGGTTCTAGAGAAGACCAGGATATGGCATTAGACAACCCACTGAACCAGCTTTCAACATTAGCCGGACAGTTAGCCAGCATCCCATCTGAAGCTGAAGGTGCGCCTGTGTCTCCCGGAGCTGAATCGCTACCTGATGAAAAACCTACATTCCTCGTCCAGCAGCCTGTAACAGCGCCCGCTGCGGTTTCGGTCAACACAGCTCAAGCTTCTTCTCCCATCACCCCAGAGCCCAGACCAGCTGCACACAGCGGCTGCAGTCCAGGTGTGGGACCCTGCAGCGAGAGGACCAGCACTCCGAGCGGAACCAACAGCCAGCCAGGGACGCCCACTCCAGTACAGGACCCCCAGATGCTCCATCACTGCCCACATTGTCACATATATTTCCCAGATAACATCCTCTATACCATTCACATGGGCTGCCATGGCTATGAGAACCCTTTTCAGTGTAACATATGCGGGCACAGGTGCAGAAACAGTTATGACTTTGCCTGTCACTTCGCAAGAGGGCAGCACAAATAAGGACACACACTAGGGTTTTACCGGCCTCCTCTTTGCCCTGTTTTACATAATAATGCGATTTTAGTATCAGGAACATTCCAAAGACAAATTCGGGTGAGCCTGCGTTGTTCTTATTTTATTTGAACTCTTATTGGCATGTTATTTGTCTTTGTAAAGGTTGTAAATGGTGTCCTCCTCACATTAAAAACTATCAATATAGATTATCCGACTTTTGCAGTCATGCAGATTTTTTGCCTCAACTCTCTTTTATAAGTGCCAGAGTTTGATAATCAGTGCCTACAGTTATTTTCTGAAAGTTAACACTTcaaattttgtattttcttttgcttttttacaTTTGGACTTCTGAATGACTGTAAATGTTCTCATGTTTTAGTCGTGACATGACCTTCGCCACATTTAACACTTTTCCTCTTCTCTAATTAcggattaaattattatttgcttTGTGCCTCATTATTTAAACTTAACTTAATTCAGCAAGATTGTGATTGAAGATGAACATTTCTAGCAGAGGTAAGTACGTTGGCTGTTTAGCAGTAAAAAAAACGTGTCCTGTAGGATTGTTGTTCAAGATTTTACTGTAGTGGCCTAAGGTCTTCTTCTCCATACTTAGCACCATAGCACATGGCTGTATACACTGGTTTTGTAAAGCAGTGTTGATGATTGTGTTCGGACGGTGTAAGCGCACGgttctctttctttctgtcattCTCTCTCCCTCATCGCTACCATCAGTGCCATGCTGTAGAtgttatttgtaatgtttttggaAACATTTGTGGTGCTACTACTATTGAAGCGTTTCATATTCCTGTCTGCATAATGAACTAAATTATCAGATAAGTATTGTATGTTTTGGTGGATTTGATGTTGAATGTCAATAAACCTGACTTATGCGATGTGTACTGGAA
>TCONS_00022683
AGCGGCGCACCGCCAGATTGAACTTTCACCCCTacgttttcttttgttttgatggCGCAGAGCATCATTTTGGCCCTCCAAAGATTGTTTTTGCACTTCATTCGCCAATGACACAGTCCAAAAAGACAAAAGGAGCATGTTTAAAAGACGTCAGTCCAGCTGCCGCTCAAATGTAAAGCTCGTTTAAATCCCGTTTTAATTGATCCAGTCGCGCTAACTCGCTGACGTTAGCTGTCCAGCATCACCATGGAGCTTTTCTCGGTCAGATTTTTCTAAAAACTCCTTAAATAAGGGGTTCGTCAGTCAACAAATCCAGCAACCGAGTGTGGTTTTAATTCAGCTGACACCCTTGAAAAGCCTGTTTGACCACAGTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAGCACCCAGCAGTAGACATGTCCTTAGAGGACAGTTCAGGGATGTTGGTGGATGGCTTTGAGAGGACATATGATGGAAAACTCAAGTGCCGCTACTGCAACTATGCCACCAGGGGGACTGCACGACTTATTGAACACATACGCATACACACAGGTGAAAAACCACACAGATGCCACCTGTGTCCTTTCGCCTCGGCCTACGAGCGCCATCTAGAGGCTCACATGCGCTCTCACACAGGTGAGAAACCCTACAAGTGTGAGCTGTGCTCCTTCCGCTGTAGCGATCGCAGTAACCTTTCCCACCACCGTCGTCGTAGACATAAACTCCTCCCAATGAAGGGCGCCCGCTCTGCTCTTTCCCATCGGAAGATGCTCAGCGTCCTGCAGAAGAGAGGAAACTCTTTAGGTTATGGCCGCCGACTGCTCATCAACCTCAGCCCGCCATCCATGGTCTTGCAAAAGCCCAGCTCTGAGCAGCACCACCTGGGGGACTTCACTCACGACCTCCCTCCTCACGCTCACCTTCATCAGGAAGCTTATAACGGTCTAGGAAAGGATCCACAAGCAATCGGTGGAGCAATCGGAAGTGGTTCTAGAGAAGACCAGGATATGGCATTAGACAACCCACTGAACCAGCTTTCAACATTAGCCGGACAGTTAGCCAGCATCCCATCTGAAGCTGAAGGTGCGCCTGTGTCTCCCGGAGCTGAATCGCTACCTGATGAAAAACCTACATTCCTCGTCCAGCAGCCTGTAACAGCGCCCGCTGCGGTTTCGGTCAACACAGCTCAAGCTTCTTCTCCCATCACCCCAGAGCCCAGACCAGCTGCACACAGCGGCTGCAGTCCAGGTGTGGGACCCTGCAGCGAGAGGACCAGCACTCCGAGCGGAACCAACAGCCAGCCAGGGACGCCCACTCCAGTACAGGACCCCCAGATGCTCCATCACTGCCCACATTGTCACATATATTTCCCAGATAACATCCTCTATACCATTCACATGGGCTGCCATGGCTATGAGAACCCTTTTCAGTGTAACATATGCGGGCACAGGTGCAGAAACAGTTATGACTTTGCCTGTCACTTCGCAAGAGGGCAGCACAAATAAGGACACACACTAGGGTTTTACCGGCCTCCTCTTTGCCCTGTTTTACATAATAATGCGATTTTAGTATCAGGAACATTCCAAAGACAAATTCGGGTGAGCCTGCGTTGTTCTTATTTTATTTGAACTCTTATTGGCATGTTATTTGTCTTTGTAAAGGTTGTAAATGGTGTCCTCCTCACATTAAAAACTATCAATATAGATTATCCGACTTTTGCAGTCATGCAGATTTTTTGCCTCAACTCTCTTTTATAAGTGCCAGAGTTTGATAATCAGTGCCTACAGTTATTTTCTGAAAGTTAACACTTcaaattttgtattttcttttgcttttttacaTTTGGACTTCTGAATGACTGTAAATGTTCTCATGTTTTAGTCGTGACATGACCTTCGCCACATTTAACACTTTTCCTCTTCTCTAATTAcggattaaattattatttgcttTGTGCCTCATTATTTAAACTTAACTTAATTCAGCAAGATTGTGATTGAAGATGAACATTTCTAGCAGAGGTAAGTACGTTGGCTGTTTAGCAGTAAAAAAAACGTGTCCTGTAGGATTGTTGTTCAAGATTTTACTGTAGTGGCCTAAGGTCTTCTTCTCCATACTTAGCACCATAGCACATGGCTGTATACACTGGTTTTGTAAAGCAGTGTTGATGATTGTGTTCGGACGGTGTAAGCGCACGgttctctttctttctgtcattCTCTCTCCCTCATCGCTACCATCAGTGCCATGCTGTAGAtgttatttgtaatgtttttggaAACATTTGTGGTGCTACTACTATTGAAGCGTTTCATATTCCTGTCTGCATAATGAACTAAATTATCAGATAAGTATTGTATGTTTTGGTGGATTTGATGTTGAATGTCAATAAACCTGACTTATGCGATGTGTACTGG
>TCONS_00022684
GTCAGACTAATACAACTCAGTAATGTTTGTTACAACTGCCACAAGTTCAGCTTGAACTTACGAGCTGAAGATTTTACAGCTTTGTTTACTGTATTTGCTGGCATGGGACTGTTATTGTAAAGGGTTCGATTGGATTCACACTTTACACCTGTTTGACCACAGTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAGCACCCAGCAGTAGACATGTCCTTAGAGGACAGTTCAGGGATGTTGGTGGATGGCTTTGAGAGGACATATGATGGAAAACTCAAGTGCCGCTACTGCAACTATGCCACCAGGGGGACTGCACGACTTATTGAACACATACGCATACACACAGGTGAAAAACCACACAGATGCCACCTGTGTCCTTTCGCCTCGGCCTACGAGCGCCATCTAGA
>TCONS_00022685
tttatttacgCTACAGCCTGTTTGACCACAGTGGAAGACTCTAGATCTTCAATGGGCGAGGAGAAGCCAGAACCACTGGATTTCGTGAAGGACTTTCAGGAGTACCTGAGCCAACAGACCCAACATGTCAACATGATATCAGGCTCTGTCATCGGTGTGAAAGACAGTGATGATCTGCAAGGAGAACTTGCTCAGAATGGCCTGGAGCACCCAGCAGTAGACATGTCCTTAGAGGACAGTTCAGGGATGTTGGTGGATGGCTTTGAGAGGACATATGATGGAAAACTCAAGTGCCGCTACTGCAACTATGCCACCAGGGGGACTGCACGACTTATTGAACACATACGCATACACACAGGTGAAAAACCACACAGATGCCACCTGTGTCCTTTCGCCTCGGCCTACGAGCGCCATCTAGAGGCTCACATGCGCTCTCACACAGGTGAGAAACCCTACAAGTGTGAGCTGTGCTCCTTCCGCTGTAGCGATCGCAGTAACCTTTCCCACCACCGTCGTCGTAGACATAAACTCCTCCCAATGAAGGGCGCCCGCTCTGCTCTTTCCCATCGGAAGATGCTCAGCGTCCTGCAGAAGAGAGGAAACTCTTTAGGTTATGGCCGCCGACTGCTCATCAACCTCAGCCCGCCATCCATGGTCTTGCAAAAGCCCAGCTCTGAGCAGCACCACCTGGGGGACTTCACTCACGACCTCCCTCCTCACGCTCACCTTCATCAGGAAGCTTATAACGGTCTAGGAAAGGATCCACAAGCAATCGGTGGAGCAATCGGAAGTGGTTCTAGAGAAGACCAGGATATGGCATTAGACAACCCACTGAACCAGCTTTCAACATTAGCCGGACAGTTAGCCAGCATCCCATCTGAAGCTGAAGGTGCGCCTGTGTCTCCCGGAGCTGAATCGCTACCTGATGAAAAACCTACATTCCTCGTCCAGCAGCCTGTAACAGCGCCCGCTGCGGTTTCGGTCAACACAGCTCAAGCTTCTTCTCCCATCACCCCAGAGCCCAGACCAGCTGCACACAGCGGCTGCAGTCCAGGTGTGGGACCCTGCAGCGAGAGGACCAGCACTCCGAGCGGAACCAACAGCCAGCCAGGGACGCCCACTCCAGTACAGGACCCCCAGATGCTCCATCACTGCCCACATTGTCACATATATTTCCCAGATAACATCCTCTATACCATTCACATGGGCTGCCATGGCTATGAGAACCCTTTTCAGTGTAACATATGCGGGCACAGGTGCAGAAACAGTTATGACTTTGCCTGTCACTTCGCAAGAGGGCAGCACAAATAAGGACACACACTAGGGTTTTACCGGCCTCCTCTTTGCCCTGTTTTACATAATAATGCGATTTTAGTATCAGGAACATTCCAAAGACAAATTCGGGTGAGCCTGCGTTGTTCTTATTTTATTTGAACTCTTATTGGCATGTTATTTGTCTTTGTAAAGGTTGTAAATGGTGTCCTCCTCACATTAAAAACTATCAATATAGATTATCCGACTTTTGCAGTCATGCAGATTTTTTGCCTCAACTCTCTTTTATAAGTGCCAGAGTTTGATAATCAGTGCCTACAGTTATTTTCTGAAAGTTAACACTTcaaattttgtattttcttttgcttttttacaTTTGGACTTCTGAATGACTGTAAATGTTCTCATGTTTTAGTCGTGACATGACCTTCGCCACATTTAACACTTTTCCTCTTCTCTAATTAcggattaaattattatttgcttTGTGCCTCATTATTTAAACTTAACTTAATTCAGCAAGATTGTGATTGAAGATGAACATTTCTAGCAGAGGTAAGTACGTTGGCTGTTTAGCAGTAAAAAAAACGTGTCCTGTAGGATTGTTGTTCAAGATTTTACTGTAGTGGCCTAAGGTCTTCTTCTCCATACTTAGCACCATAGCACATGGCTGTATACACTGGTTTTGTAAAGCAGTGTTGATGATTGTGTTCGGACGGTGTAAGCGCACGgttctctttctttctgtcattCTCTCTCCCTCATCGCTACCATCAGTGCCATGCTGTAGAtgttatttgtaatgtttttggaAACATTTGTGGTGCTACTACTATTGAAGCGTTTCATATTCCTGTCTGCATAATGAACTAAATTATCAGATAAGTATTGTATGTTTTGGTGGATTTGATGTTGAATGTCAATAAACCTGACTTATGCGATGTGTACTGGAA

Function

symbol description
ikzf5 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within determination of intestine left/right asymmetry; determination of left/right asymmetry in lateral mesoderm; and determination of pancreatic left/right asymmetry. Predicted to be located in nucleus. Is expressed in several structures, including brain; digestive system; eye; pharyngeal arch cartilage; and thymus. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5).

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0003140 determination of left/right asymmetry in lateral mesoderm biological_process
GO:0071908 determination of intestine left/right asymmetry biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0035469 determination of pancreatic left/right asymmetry biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040801-209 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within determination of intestine left/right asymmetry; determination of left/right asymmetry in lateral mesoderm; and determination of pancreatic left/right asymmetry. Predicted to be located in nucleus. Is expressed in several structures, including brain; digestive system; eye; pharyngeal arch cartilage; and thymus. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5).

Ensembl:

ensembl_id ENSDARG00000056491

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022680 False 2986 mRNA 0.43 4 21760032 21822840
TCONS_00022681 False 304 mRNA 0.44 3 21817002 21819782
TCONS_00022682 False 2560 mRNA 0.46 4 21817382 21822198
TCONS_00022683 False 2564 mRNA 0.46 4 21817391 21822196
TCONS_00022684 False 550 mRNA 0.47 4 21817859 21820392
TCONS_00022685 True 2225 mRNA 0.46 3 21818093 21822198

Neighbor

gene id symbol gene type direction distance location
XLOC_011389 NA coding upstream 56541 21667797 ~ 21703491 (+)
XLOC_011388 BX927351.1 coding upstream 152323 21564607 ~ 21607709 (+)
XLOC_011387 chst15 coding upstream 196258 21514777 ~ 21563774 (+)
XLOC_011386 pla2g4f.2 coding upstream 265737 21477892 ~ 21494295 (+)
XLOC_011385 pla2g4f.1 coding upstream 292602 21452258 ~ 21467430 (+)
XLOC_011391 plekha1a coding downstream 64983 21887823 ~ 21913328 (+)
XLOC_011392 AL773596.1 coding downstream 94608 21917448 ~ 21917564 (+)
XLOC_011393 htra1a coding downstream 96291 21919131 ~ 21959556 (+)
XLOC_011394 crip3 coding downstream 141632 21964472 ~ 21982835 (+)
XLOC_011395 NA coding downstream 247092 22069932 ~ 22071151 (+)
XLOC_011381 NA non-coding upstream 669920 21089774 ~ 21090112 (+)
XLOC_011380 NA non-coding upstream 773656 20979252 ~ 20986376 (+)
XLOC_011379 NA non-coding upstream 819201 20938254 ~ 20940831 (+)
XLOC_011400 BX511245.1 non-coding downstream 736215 22559055 ~ 22572656 (+)
XLOC_011404 dre-mir-456 non-coding downstream 1004223 22827063 ~ 22827147 (+)
XLOC_011407 AL935174.6 non-coding downstream 1399337 23222177 ~ 23232294 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000312_00868747_00873131 IKZF5 coding CI01000312 null 868747 ~ 873716 (+)