XLOC_011404 (dre-mir-456)


Basic Information

Item Value
gene id XLOC_011404
gene name dre-mir-456
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 22827063 ~ 22827147 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022707
GCTGGTTGTGTGTGCAGGCATCTTTCCAGTCTACATGTGGATCCAGGAGTCTGCAGGCTGGTTAGATGGTTGTCACGTACCCAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080349

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022707 True 85 miRNA 0.54 1 22827063 22827147

Neighbor

gene id symbol gene type direction distance location
XLOC_011402 birc6 coding upstream 85334 22587356 ~ 22741729 (+)
XLOC_011401 yipf4 coding upstream 241467 22577472 ~ 22585596 (+)
XLOC_011400 BX511245.1 coding upstream 254407 22559055 ~ 22572656 (+)
XLOC_011399 edaradd coding upstream 284853 22530820 ~ 22542210 (+)
XLOC_011398 slc8a1b coding upstream 325093 22311413 ~ 22501970 (+)
XLOC_011405 ltbp1 coding downstream 129280 22956427 ~ 23116523 (+)
XLOC_011406 rasgrp3 coding downstream 319829 23146976 ~ 23201215 (+)
XLOC_011407 AL935174.6 coding downstream 395030 23222177 ~ 23232294 (+)
XLOC_011408 AL935174.1 coding downstream 396657 23223804 ~ 23223920 (+)
XLOC_011409 AL935174.4 coding downstream 428218 23255365 ~ 23262007 (+)
XLOC_011395 NA non-coding upstream 755912 22069932 ~ 22071151 (+)
XLOC_011392 AL773596.1 non-coding upstream 909499 21917448 ~ 21917564 (+)
XLOC_011389 NA non-coding upstream 1123572 21667797 ~ 21703491 (+)
XLOC_011388 BX927351.1 non-coding upstream 1219354 21564607 ~ 21607709 (+)
XLOC_011412 AL929195.9 non-coding downstream 503024 23330171 ~ 23330311 (+)
XLOC_011413 AL929195.1 non-coding downstream 504272 23331419 ~ 23331559 (+)
XLOC_011414 AL929195.5 non-coding downstream 508454 23335601 ~ 23335741 (+)

Expression


Co-expression Network