CI01000127_02104870_02106881


Basic Information

Item Value
gene id CI01000127_02104870_02106881
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2104870 ~ 2107177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000127_02104870_02106881.mRNA
GACCACGCAAACCGGAGTTACAGTTTGGCATCATCGGTTCGGTTCACATTGCCGCCGGCCAGGTCACAGCGAGCGAGTGTACGAGACCGGGATCCACAGACCGGGCGGCCGGGACAAGAGCTGTGTGTGTCGGCAGAGAGACGCTCAGCATCAGCGTTCACACAATCAGAACTGACAGACTGAAACTGAAAGTTTGTGACTGTAATGTGATCGACGAGCTCTTGGCGAGCGGAGATCCCGTGTTGGACCTGAGCTACTACAAGTTCCGTCACCTTCCTCGTCAAGTCCTGGATCTGGAGTACCTGGAGAAGCTCTACGTCTGTGGAAACCGTCTCCGCAACGTCCCCAAGGGCATCACGCGGCTGCAGGGTTTGCGTACCCTGGCACTTGACTTCAATAAGCTCGAAGATGTTCCCCTCACTGTGTGCAAGCTGACCAATCTCACGTGTCTTTACCTGGGAAGCAACCGGCTTATGAGCCTCCCACCAGAAGTGAGGAACTTGCAGAGCTTACGTTGCCTCTGGGTGGAGAGCAACTACTTCCAGCGATTCCCCAAGCAGTTGTACGACCTTCCCAATCTACGCTCTTTGCAGATCGGGGACAACCGTCTGCGCACCCTTCCCTCGGACCTATGGCGCATGGAGGCCCTGAGAGGACTCTGGCTGTATGGAAACCGCTTTCAGGAGTTTCCGCGAGTGCTCCTCAAGATGGAGCAGCTGGAGATTCTGGACATGGACCGCAATCGGATATCAGAGTTCCCAAACTTGCATCATCTTCCTGCGCTGCGACTCTTCTCCTACGACCACAACCCTGTAAAGGAGCCGCCCCGTGTAGGGGAGGAGGTGCTTATTGTTGGGGAAGGGGCTGAGGAGGTCTTGCAGGCAAGAGAGAGAAGGAAAGAGGCAAAAGAACGTGCAGAGAAGGAAGCAGAGGAGGCGGCGGCCGCTGCGGCAGCAGCAGCTAATCCAGTCATTCACGGAATACTCAAGAAACTCCGAATGAGCTCCGCCCTCAACTTGGCAGCTGCTAAGGTGAAAGAAACAAATGGGTCGGGTCCATCAACAGGGGACGAGGACGGAACACAAAATAATGACAAAGAGGCGGAGTCTGAGAAACAAAGTGTGGCGGAGCTTGGGTATGACGATGACGGCTTGGAGTATGAAAGGGAGGAGCTAGTCTACGAGGGGGAGGGGTATGACGGCTACGAGGGGGCGGAGTTAGAGTATGAGAGAGCCGAAATGGATTATGAATATGAAGGGGAGGAGCAAGAAGAACCTTGATGCTCGCACCTCTTCTATGGGTCATGGTAGTCTGAAGTGTGTACTTTCTGCAAACAGAAATGCAGTTTGTTTCAACAGCCATCAGTCTTCAGCCAACATTCATTATTGTTTGCAACTCTGTGGTGCAGATGCTACACACTTCTGCTTTACTCATCTGAAGTATTACTGCAAGGGTTGCAGGTTCAATCCCAAGGATGAACTGGAGAGTAACTAAGAGTTATTGGGGCCCTGATAATGGCACTTAAGTAACCCCAGAATGCTTTATGGGGTAAAGAAAGCGACTGCAAGTCGCTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000127_02104870_02106881.mRNA True 1576 mRNA 0.53 2 2104870 2107177

Neighbor

gene id symbol gene type direction distance location
CI01000127_02075266_02086856 EPS8L2 coding upstream 17395 2075266 ~ 2087475 (+)
CI01000127_02036889_02038557 NA coding upstream 65349 2036889 ~ 2039521 (+)
CI01000127_01944313_01948146 NA coding upstream 156724 1944313 ~ 1948146 (+)
CI01000127_01932310_01942852 THOC5 coding upstream 161880 1932310 ~ 1942990 (+)
CI01000127_01882281_01884037 NA coding upstream 220819 1880780 ~ 1884051 (+)
CI01000127_02186896_02189070 NA coding downstream 79624 2186801 ~ 2189771 (+)
CI01000127_02195670_02218131 NA coding downstream 88318 2195495 ~ 2218779 (+)
CI01000127_02352702_02353332 NA coding downstream 245525 2348712 ~ 2353593 (+)
CI01000127_02443481_02466467 MYO5C coding downstream 335721 2442898 ~ 2466969 (+)
CI01000127_02467913_02475731 GNB5, GNB5A coding downstream 360736 2467913 ~ 2476306 (+)
G340771 NA non-coding upstream 3625 2098772 ~ 2101245 (+)
G340786 NA non-coding upstream 60723 2043930 ~ 2044147 (+)
G340761 NA non-coding upstream 109027 1994262 ~ 1995843 (+)
G340760 NA non-coding upstream 112230 1991377 ~ 1992640 (+)
G340729 NA non-coding upstream 190798 1909023 ~ 1914072 (+)
G340788 NA non-coding downstream 2291 2109468 ~ 2115301 (+)
G340800 NA non-coding downstream 43463 2150640 ~ 2153275 (+)
G340836 NA non-coding downstream 96163 2203340 ~ 2296340 (+)
G340889 NA non-coding downstream 190924 2298101 ~ 2299702 (+)
G340890 NA non-coding downstream 199782 2306959 ~ 2316097 (+)
G340487 NA other upstream 980720 988203 ~ 1124150 (+)
G340421 NA other upstream 1269827 834385 ~ 835043 (+)
G340122 NA other upstream 1346480 756845 ~ 758390 (+)
CI01000127_00328606_00381628 ZNF609A other upstream 1745629 328474 ~ 381628 (+)
CI01000127_00079499_00100318 NA other upstream 2023541 79277 ~ 101292 (+)
G340939 NA other downstream 383381 2490558 ~ 2512877 (+)

Expression


Co-expression Network