CI01000127_02186896_02189070


Basic Information

Item Value
gene id CI01000127_02186896_02189070
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2186801 ~ 2189771 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000127_02186896_02189070.mRNA
ATATAAAACAGAACGTCACAAAACAGCAGATCAGTGCAGAACGCTGAGGGAGGGGGATAATATCCTGCTGCGGGGCTGAAATATAGTGTGACAGAATGAACAACTGTCTGACAGGGTCTGGAGACAGACTGGTGAAGAGAAAGAGAGACAGAGCTGACCCAAACTCTGGGAGATGGGTGGCCTGCTGGCCAAATTTGGGGCCGGAGCCTGGATCAAGGGTTGCTGGAGGCTCTGCTGACGCAACAACGTGCGGGGCCGAGGCGTTGCCCCCATGGAGGGTATGTGGTCCAAGGTCTCGGTCGAGGAGAGGGTGTGGTGCGCGTGTCCGTTTCCGGCCCGAGCGAGACTGCCTTGAGACGACGATGAGCGGCGGCGAGCGTGCGTGTGCGTCTGGGAGGCATGTACGGCCTGCTTTCGTGTCGCTCCCGTGCGTGTCTGACTGGATCGCGGTGTGTGTCGGGTCTGCCCTGAACGGCCGTGCGCATGTGCGTGCCGCGGCGTGTGTGGCGTCAGTCGGCTGCCACCGGTTCTTGCGGGAGACTGCTTTTTGGTCTGTTGAGAGCCCCCCATCTCTGTCTACTCCTCGCACATGCCTCTCCTCCCTTTCTTCTCTTAACTTTGCCCGTCGTTTCTTGCGACACTCGTTTTAAGTAACGCCACGGCCCCCTGAGTGTCTTCAGCAGCCAACCAACTACGCTAGCTCATCCGTCATTCTTTTGTCCTCTCCTCCCCTCCCTTTCGCAATTATATCCCTCTCTTTCTCTCATTAGCCCTGTTTCACTTTGATCTAAAAACTGTGTCAAATTCACCTCGGAAACTTCACAGTGAGTTTCGCCTGAGCTGCTCACATGATTCCTGTAAACATTTCCTGGCTATTCTTCCTCGTTTTAGCTTGTCTAATCCCAGCAGAATTTTACCTTTAGGGTACAACAGCTTGTCACCTTTAAAGGAGACCTGCTCCTCGAGGGCCACTGTCCTGCAGAGTTTAGCTCCAGCCCCAATTAAACACACCTGAACCAGCTAATCAAAGTATATTATGCATACTAGAAACTTCCAGGCAGGTGTACTGGGGCTAAACTCTGCAGGACGTGGCCCTCCAGAAGCAAGTTTGGACACCCATGCCTTAAAGGGACATCTTATTTAGCCCTAAAAGGTTCATAGTAGTACCTTAAGGGTACATGTTGCTATTCTAAGTTACTTTTAAGGGTAGATAAGTGACAAGTGTCAAGCTGCTGTTTCCCTAAAGATACAAATTTTGCACTTTTTTCCCCCTGACAGTGTCTGTCATTGAACATTTTTTAAAAAGTCATTAAAAAGAACAACTTTTCAGAGTGATTTAGAGCTGAATGCA

Function

NR:

description
Synaptotagmin-7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000127_02186896_02189070.mRNA False 1351 mRNA 0.51 3 2186801 2189771

Neighbor

gene id symbol gene type direction distance location
CI01000127_02104870_02106881 NA coding upstream 79624 2104870 ~ 2107177 (+)
CI01000127_02075266_02086856 EPS8L2 coding upstream 99326 2075266 ~ 2087475 (+)
CI01000127_02036889_02038557 NA coding upstream 147280 2036889 ~ 2039521 (+)
CI01000127_01944313_01948146 NA coding upstream 238655 1944313 ~ 1948146 (+)
CI01000127_01932310_01942852 THOC5 coding upstream 243811 1932310 ~ 1942990 (+)
CI01000127_02195670_02218131 NA coding downstream 5724 2195495 ~ 2218779 (+)
CI01000127_02352702_02353332 NA coding downstream 162931 2348712 ~ 2353593 (+)
CI01000127_02443481_02466467 MYO5C coding downstream 253127 2442898 ~ 2466969 (+)
CI01000127_02467913_02475731 GNB5, GNB5A coding downstream 278142 2467913 ~ 2476306 (+)
CI01000127_02477517_02488780 AP4E1 coding downstream 287746 2477517 ~ 2489109 (+)
G340800 NA non-coding upstream 33526 2150640 ~ 2153275 (+)
G340789 NA non-coding upstream 69507 2044950 ~ 2117294 (+)
G340788 NA non-coding upstream 71500 2109468 ~ 2115301 (+)
G340771 NA non-coding upstream 85556 2098772 ~ 2101245 (+)
G340786 NA non-coding upstream 142654 2043930 ~ 2044147 (+)
G340836 NA non-coding downstream 13569 2203340 ~ 2296340 (+)
G340889 NA non-coding downstream 108330 2298101 ~ 2299702 (+)
G340890 NA non-coding downstream 117188 2306959 ~ 2316097 (+)
G340895 NA non-coding downstream 129358 2319129 ~ 2319452 (+)
G340896 NA non-coding downstream 129802 2319573 ~ 2319855 (+)
G340487 NA other upstream 1062651 988203 ~ 1124150 (+)
G340421 NA other upstream 1351758 834385 ~ 835043 (+)
G340122 NA other upstream 1428411 756845 ~ 758390 (+)
CI01000127_00328606_00381628 ZNF609A other upstream 1827560 328474 ~ 381628 (+)
CI01000127_00079499_00100318 NA other upstream 2105472 79277 ~ 101292 (+)
G340939 NA other downstream 300787 2490558 ~ 2512877 (+)

Expression


Co-expression Network