CI01000127_02195670_02218131


Basic Information

Item Value
gene id CI01000127_02195670_02218131
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2195495 ~ 2218779 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000127_02195670_02218131.mRNA
GGATAAATAACAATAATTTATCCCATGAGAGTGCTGCATGCGTGTGACCTCACAGCGAGCTACATGACTACATACTAACACAAGCCACCCTGGGCTTTTAAAGATGCCGTGCCAAGTGCAGCTCCTCCTTTAGGGGGCGTAGCAGAGCCACACAAATGGATTTACAACAACCCCGATGCTTCAAATAACCACATTTGACATGCTTTGCATTAATGACACCCATAAATGTTGCAGACTTCATATAGACAAAGGGTTACTTTTGTCATCAGTTTTTCATAATCGTGGTCACCAGTTTGTGGACCTGGTGAAAGTCATCATGCAGTTATCAGATTTAAGTAACACTGCCGCATCACTCAAACACTCACAATACAACATCAACACCAACAACAACATAAAAAAAACGGCAGGGACATATCTGTGTGGTTACTGTGTAGACGGGTTTAGCGTAGTTAAAAACTCCTCAAAGCACGATCTGTCCCACAGCGCTCGCTGTCTCATCCCATCTCATCCCTGCGATCCTGTTGCCCATCATCTGAGGAGGCCTGTTGGCTCAGAGATGGCCGTCATTCTAGCCGGCTCTCATTGGGCTAGTTCTGCCCGGCTGTTCTCTGAGGATGTGGCTGGAGGTGCCGGGGCAGATCAGAAAGCTTGCGTTGACACCATCCGCAGACGCCGCAGAGAGCCACCAGCCAAACGCCACACACGGTTACCGCCAACGACACCAGCAGCACGCTCAAAGAGAAGGAGCCTGTGAAACACACACACGGTGTTAATATCTGAGTGGAGGGGAAACAGTCTGACATTTACTCTGACGAGAACGCTAAGAGTTTATGAAGTCTCTGAAGTCCTAAAGATGGATCAATAGTTTTCACGGTGGGAGCAAATGTGACTGGAGAACAAAATCAGAAAGGGGAGGAAAATACATTTTGGAGAGGGAAAGAGGGAGCACTCAAAAAAATGATTTTTTTTGATGCTGTTCACTTTATTTAAACAACTTATTTTGATTCAACACAATTGTATTAGGTTTCTGGTTCAAATTTAATTGCTTCATGTTAAATTGACTTGAAACGATTACTTTTTGACTTAACTTGATGTTTTCATATTAAAATAACATGTTTCAATCAAGTAAACTCAACCAGGACTTAATCAAACAGGACTTTCACTTCCCATCATGCTTTGCAAAGGGGCTGATCTGGGAGAGTAAATGTTGAAATAAAGTGTTATTTTAAGCAGTTTTTAGCAACATGAGAAAATAGAGAGACTTTTTAATGTTTACTGTTCTATTATGTTGGTATTTAAAAGTTTCTGTTATGTTAATAGTTTTGGGGTTACCATTGTGGAGAAGTGTAGAACATGTGCTTGGGTTGAGGACCTGCTAACAACAATTAAAGTTGTTTTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000127_02195670_02218131.mRNA True 1402 mRNA 0.42 3 2195495 2218779

Neighbor

gene id symbol gene type direction distance location
CI01000127_02186896_02189070 NA coding upstream 5724 2186801 ~ 2189771 (+)
CI01000127_02104870_02106881 NA coding upstream 88318 2104870 ~ 2107177 (+)
CI01000127_02075266_02086856 EPS8L2 coding upstream 108020 2075266 ~ 2087475 (+)
CI01000127_02036889_02038557 NA coding upstream 155974 2036889 ~ 2039521 (+)
CI01000127_01944313_01948146 NA coding upstream 247349 1944313 ~ 1948146 (+)
CI01000127_02352702_02353332 NA coding downstream 133923 2348712 ~ 2353593 (+)
CI01000127_02443481_02466467 MYO5C coding downstream 224119 2442898 ~ 2466969 (+)
CI01000127_02467913_02475731 GNB5, GNB5A coding downstream 249134 2467913 ~ 2476306 (+)
CI01000127_02477517_02488780 AP4E1 coding downstream 258738 2477517 ~ 2489109 (+)
CI01000127_02532996_02543896 DRD4A coding downstream 314217 2532996 ~ 2543950 (+)
G340800 NA non-coding upstream 42220 2150640 ~ 2153275 (+)
G340789 NA non-coding upstream 78201 2044950 ~ 2117294 (+)
G340788 NA non-coding upstream 80194 2109468 ~ 2115301 (+)
G340771 NA non-coding upstream 94250 2098772 ~ 2101245 (+)
G340786 NA non-coding upstream 151348 2043930 ~ 2044147 (+)
G340889 NA non-coding downstream 79322 2298101 ~ 2299702 (+)
G340890 NA non-coding downstream 88180 2306959 ~ 2316097 (+)
G340895 NA non-coding downstream 100350 2319129 ~ 2319452 (+)
G340896 NA non-coding downstream 100794 2319573 ~ 2319855 (+)
G340897 NA non-coding downstream 101288 2320067 ~ 2320327 (+)
G340487 NA other upstream 1071345 988203 ~ 1124150 (+)
G340421 NA other upstream 1360452 834385 ~ 835043 (+)
G340122 NA other upstream 1437105 756845 ~ 758390 (+)
CI01000127_00328606_00381628 ZNF609A other upstream 1836254 328474 ~ 381628 (+)
G340939 NA other downstream 271779 2490558 ~ 2512877 (+)

Expression


Co-expression Network