XLOC_011412 (AL929195.9)


Basic Information

Item Value
gene id XLOC_011412
gene name AL929195.9
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 23330171 ~ 23330311 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022717
ATTCTTTCGCAGAGGCAATATCATAGCCTATGAGGCCTAGCCGAGGTGTGATCATTGCTGGTTGAAAACTTTACCCAATACCCCGCCGAGATGGCTTGAAATACAGTCAGCTCTGGCAATTTTTGACAGCCTCCTAGAAGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116291

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022717 True 141 snRNA 0.48 1 23330171 23330311

Neighbor

gene id symbol gene type direction distance location
XLOC_011411 ppp1r3ca coding upstream 15993 23311377 ~ 23314178 (+)
XLOC_011410 fgfbp3 coding upstream 27850 23298928 ~ 23302321 (+)
XLOC_011409 AL935174.4 coding upstream 68164 23255365 ~ 23262007 (+)
XLOC_011407 AL935174.6 coding upstream 97877 23222177 ~ 23232294 (+)
XLOC_011408 AL935174.1 coding upstream 106251 23223804 ~ 23223920 (+)
XLOC_011413 AL929195.1 coding downstream 1108 23331419 ~ 23331559 (+)
XLOC_011414 AL929195.5 coding downstream 5290 23335601 ~ 23335741 (+)
XLOC_011415 AL929195.8 coding downstream 11563 23341874 ~ 23342014 (+)
XLOC_011416 AL929195.3 coding downstream 15927 23346238 ~ 23346378 (+)
XLOC_011417 AL929195.7 coding downstream 18018 23348329 ~ 23348469 (+)
XLOC_011404 dre-mir-456 non-coding upstream 503024 22827063 ~ 22827147 (+)
XLOC_011400 BX511245.1 non-coding upstream 757515 22559055 ~ 22572656 (+)
XLOC_011395 NA non-coding upstream 1259020 22069932 ~ 22071151 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000350_01535430_01540326 NA coding CI01000350 null 1535273 ~ 1542278 (-)