G340789


Basic Information

Item Value
gene id G340789
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2044950 ~ 2117294 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU387807
GGGTGTGGAACGACATGAGGGTGAGTAATTAATGACATAATTTTCATTTTTGGGTGAACCTTTTGAGGGTTAAGAGTGTTTTTATAATGTTTCTATGCGGTTGCTAGTGTTCTAGGTGGTTGCTTATACAGTCAAACCCAAATTTATTCAGACACCTTGAACATTTCATTTATTAATACAGTTTATTCACTATAGTTTAATAAAATATGACAAGATCTCAGAGTTAAACTGAGTTAAACCATGGGATAATTTCAAAATCTGGACATTTTCAGAGACAGGAGAAGAGATATTCTGATGATTGCTGTGTACAGAATTTATCTGAGAAAGCCGTGGCTCGTAAACATACAGGATTATTTCACCACAGTGTCAGTTCTTGTCTAAATAATGATCGCGACACTGCAGTGTGTGTGAGACTTGATGAATGAGATCAGAATCAACATATATATTATTCATTTGAATTAAATATTTTGGTCATTATTTTGCGTCATTTTTCATTGACAATAATTTCACTGTATGTATTCACAACATTTGTCAAAATTCATAATTAATATTCAAAGCAATCACGCTGTCAACGCATTTCTGATTAAGATTACTTAAAGGGATAGTTCACCCAAAAATGAAAATTTGATGTTTATCTGCTTACCCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387807 True 649 lncRNA 0.33 2 2044950 2117294

Neighbor

gene id symbol gene type direction distance location
CI01000127_02036889_02038557 NA coding upstream 5429 2036889 ~ 2039521 (+)
CI01000127_01944313_01948146 NA coding upstream 96804 1944313 ~ 1948146 (+)
CI01000127_01932310_01942852 THOC5 coding upstream 101960 1932310 ~ 1942990 (+)
CI01000127_01882281_01884037 NA coding upstream 160899 1880780 ~ 1884051 (+)
CI01000127_01865774_01877178 INCENP coding upstream 167706 1865774 ~ 1877244 (+)
CI01000127_02186896_02189070 NA coding downstream 69507 2186801 ~ 2189771 (+)
CI01000127_02195670_02218131 NA coding downstream 78201 2195495 ~ 2218779 (+)
CI01000127_02352702_02353332 NA coding downstream 235408 2348712 ~ 2353593 (+)
CI01000127_02443481_02466467 MYO5C coding downstream 325604 2442898 ~ 2466969 (+)
CI01000127_02467913_02475731 GNB5, GNB5A coding downstream 350619 2467913 ~ 2476306 (+)
G340786 NA non-coding upstream 803 2043930 ~ 2044147 (+)
G340761 NA non-coding upstream 49107 1994262 ~ 1995843 (+)
G340760 NA non-coding upstream 52310 1991377 ~ 1992640 (+)
G340729 NA non-coding upstream 130878 1909023 ~ 1914072 (+)
G340695 NA non-coding upstream 311822 1732896 ~ 1733128 (+)
G340800 NA non-coding downstream 33346 2150640 ~ 2153275 (+)
G340836 NA non-coding downstream 86046 2203340 ~ 2296340 (+)
G340889 NA non-coding downstream 180807 2298101 ~ 2299702 (+)
G340890 NA non-coding downstream 189665 2306959 ~ 2316097 (+)
G340895 NA non-coding downstream 201835 2319129 ~ 2319452 (+)
G340487 NA other upstream 920800 988203 ~ 1124150 (+)
G340421 NA other upstream 1209907 834385 ~ 835043 (+)
G340122 NA other upstream 1286560 756845 ~ 758390 (+)
CI01000127_00328606_00381628 ZNF609A other upstream 1685709 328474 ~ 381628 (+)
CI01000127_00079499_00100318 NA other upstream 1963621 79277 ~ 101292 (+)
G340939 NA other downstream 373264 2490558 ~ 2512877 (+)

Expression


Co-expression Network