CI01000136_01339600_01342904


Basic Information

Item Value
gene id CI01000136_01339600_01342904
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000136
NCBI id null
chromosome length 2054048
location 1337726 ~ 1342904 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000136_01339600_01342904.mRNA
ATGACCCATGTCGTGCCGCATCAGCGGTTTGACGACGTGGGCGAATACGTAATGAATTTTAATGGAGGGCAGCGAGCCTGGGAACTGCTCTATCAGTCGTCCCTGTATCCGAGACTTGATGGAGCACTGTACTCACCTGCCAGTTTCGTCATAACCCTTCATTCGCAACTTTCCTGCAAAATTACACTTTCAAAGAGGCTCCTAGCGAATGTTATGGGTCTATATTTAATAATTGCTGGTCCCACACCACTCTTGATTTTGCTGATCTACAGACCGCCTGAACATCATGCAAACTTTCTCTCTGATCTCTCCGAGTTGCTCACTATTGCTTGTGCTCAATATAACAATATTATTATGCTTGGTGATTTCAATATTCATGTGGATTCTGACTGTACTTCTGCTAAGGACTTTATGGCTATATTGGACTGTTTTGATTTAGCACAGCACATTGATTTTCCTACACACTGCCATTCTCATACCCTTGACTTAATCTGCTCCGTTGGTATTAATAATGTTTGTGTCCAGGGTCTCGAAGTTGGCATATCTGACCATAAACTCATTGACTTTAGTTTCTCTCTCCCTCTTGCCAAATCTAAAATCAAATCTACAATATCTTATCGAAATCTGAAAAACATAAACGCTGACAATTTCTCTACTGCTATTGCTGCTTCCTCTTTGCCTCTCTCTGTTAATCTCTGTTGTCCTGGTGAGATTCTCTTATCATATAACGAAGCTACATCTAATGTCTTGGAAGCTCTGGCCCCAGTAAAGACCAGAACTGTCCCCTCAGCTCATTCTTCCCCTTGGTTCATCCCAGAGCTCAGATTAATGAAAGCAAAGGCTAGGCATCTTGAACGTCTCTATAAGAAGACTTGTCTTCCTGTTCACGTTATTCTCTACTCTGAATTCATATCACAATATAAAAAAGCCCTTAACACTGCACGCGCTACTTACTTGTCTAATATTATAAACAGAGCAAAGTGTAAACCCAGGACCCTATTTTTGTGAGATCAACAAACTTGTTAAACCACCATCTCCACTTCTTAATGATTCTTCTGACCTTTGTGAAAATTTTCTGATATTTTTTACACACAAAATTGGCAATATCTATCAATCTTGTTCTTCTTTTATTCCTTCAAAAACTTCTACTTTCCAGATACCCTACCCACTCTCTAACTTTACTCTCACCAGTACATCTGTGGCTGAACAGCTGATTATGAGCTCTAACTCCTCCACCTGCCAGTTAGATCCTTTACCAACACATCTACTCAAAAACTTTCTCCCTTCCCTCATACCTATCATTCACATGATAAATAGTTCCCTTATGACTGGTTATGTACCACCTGGACTGAAAATAGCCATGATCACCCCATACTTAAAAAACCTGGCCTTGATGACACAGTACTGAGTAACTTTAGACCAATTTCCAACCTTCCTTTTTTGTCTAAAGTCCGAGAAAAGGTGGTCGCCACACAACTGCAGACTCACTTGGACAAAAATAATCTGCAGGAACCATTTCAGTCTGGTTTTCGCTCCCTCCACAGTACAGAGACTGCTCTTCTGAAAGTACTGAACAACCTCCTCCTCGCCTCTGATTCTGGTGTCCTAAGCCTTCTGGTCCTTTCGGAGTTGAGTTCAGCTTTTGATACCGTCTGCCACTCTATACTTCTGTCCCGAAACAGTTTTACAATGGCTAAGTTCATATCTCACAGACAGGCAGCAGTTCATTAGCAATTCAACTCTCATTCTGTCACCTTTTCCTGTGGAGTGCCTCAAGGATCTGTCCTTGGTCCACTTTTATTTTTAATCTACACACTTCCCCTAGGTCAGATCATCCGGTGCCATGGCTTTAATTTCCACAGTTATGCTGACGACACACAAATTTATTTGACTGTACAGCCTAATTCTGTTTTTCCTCCCTTTTCTTTAACATCTTGCTTACACAATCTCAAAATATGGATGGCTCAAAACTACTTAAAGTTGAATATGGAAAAAACTGAAATTCTGCTAGTAGGCCCTAAATCCCTTGATCTCTCCCATCATGACTTTTCTATTAACATTGACGGTGTTCTGTTTCAGCCCTCTTCCACTATACGAAACCTCGGTGTGTTTGATTCTAGGCTATGTTTTGAACCTCATATCAATCAGCTTGTCAAGTCTTGTTTCTTCCATCTTCACAACATTGTCATTTTAAGGCCCTCACTAAATTTCAAAGATGTGGAAACTGTTGTTCATGCTTTTATAACTTCACGTCTTGATTATTGCAACTTCTTGTTTTATGATCTACCCAAAAAAGTCATAAATTGCTTGCAGTTCATTCAGAATTCAGCTGCTCGGGCCCTCACTTTTACCAAAAAATCAGCTCACATCACCCCTGTCTTACAGCAACTACATTGGCTTCATTGTTAGTTACCGCATCCAGTTCAAGATTCTTGCTCTAGTTATCAAGGCTCGTCATGGTTTAGCACCTTCTTATCCCTCCGAATTGATTATCCCCTATGTCCCTGCCCGTACTCTGAGATCGAGCTCTGAAAATTTGCTTGCAGTACCCAAGTTCCGTCTATCTAGTGTGGGTGGTAGGGCTTTCAGCATATCAGCTTCTAAGCTCTGGAACAAACTACCACAAGACCTTCGTGATGTCTCTTCTCTTCAGACCTTTAAAACTGCTCTCAAAACTCACTTATTCACATTATGTTTTGTTAATTGATTGTTTCAATTTTCCAGCTCTATGCTTGTTTTTGTAAGTTTGATGTAGATTAACTTTCTTTGTCTGTTCCATCTGGTCAATTACGTGTTGTATGCTGACTGTATTGTATATGTATTCATGTTATCTAGTAGCTTCATGTAAAGCATCCTTGGGTTCTTGAAAGGTGCTAAATAAA

Function

NR:

description
reverse transcriptase-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000136_01339600_01342904.mRNA True 2882 mRNA 0.40 3 1337726 1342904

Neighbor

gene id symbol gene type direction distance location
CI01000136_00357437_00448405 SDK2 coding downstream 889267 357428 ~ 448459 (-)
CI01000136_00330405_00331394 CDC42EP4B, CDC42EP4 coding downstream 1006213 329245 ~ 331513 (-)
CI01000136_00283083_00288092 TEKT3 coding downstream 1049237 283043 ~ 288489 (-)
CI01000136_00261536_00270931 PMP22B, PMP22 coding downstream 1066207 260454 ~ 271519 (-)
CI01000136_00117448_00133110 NA coding downstream 1204037 117014 ~ 134788 (-)
CI01000136_01611161_01611888 NA coding upstream 267745 1610649 ~ 1612568 (-)
CI01000136_01961834_02044196 NA coding upstream 618690 1961594 ~ 2044196 (-)
G348312 NA non-coding downstream 62072 1275364 ~ 1275654 (-)
G348308 NA non-coding downstream 64732 1272788 ~ 1272994 (-)
G348300 NA non-coding downstream 72709 1264710 ~ 1265017 (-)
G348297 NA non-coding downstream 75106 1262318 ~ 1262620 (-)
G348296 NA non-coding downstream 81347 1256153 ~ 1256379 (-)
G348506 NA non-coding upstream 98390 1441294 ~ 1443404 (-)
G348549 NA non-coding upstream 151832 1494736 ~ 1495066 (-)
G348534 NA non-coding upstream 163803 1506707 ~ 1511906 (-)
G348557 NA non-coding upstream 178243 1521147 ~ 1521539 (-)
G348567 NA non-coding upstream 190968 1533872 ~ 1534322 (-)
G348257 NA other downstream 129762 1207674 ~ 1207964 (-)
G348732 NA other upstream 424546 1767450 ~ 1782356 (-)
G348891 NA other upstream 587089 1929993 ~ 1930356 (-)

Expression


Co-expression Network