XLOC_011530 (ldah)


Basic Information

Item Value
gene id XLOC_011530
gene name ldah
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 30749251 ~ 30817230 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022975
AGTCGCTCCGTTGGTTTGATGGTACCTGTCCTAGGAAGATTACCAGTAAATGTCATTTCATCTGTTCTTACAAACATTCTCCGCTCACAAAAACTCAAAAGAATATCATCTGTCGGCCAAGAACTGTGTGGAGCTGATTCGGTTGATGTGATGAACAGCTCAGGATCGGAAGGGCCTGGAGAAGATGCCTCTGTGGAGTTTGTCTACTGCAGAGGGGTAGTCACAGAGCTGCTCAAATATGGACCAAAAGACCTGCATACCGCCAGCAAAGGCCCAAACTCTCCCAAAACACTCATTCTTGTCATTCCAGGTAACCCAGGTGTGGTGGGCTTCTACAAGACATACATGTGGACACTGTATCAGAAGTTTCTCCAGAGATATCCAGTGTGGGCTGTGAGCCATGCTGGACACTGTATGCCTCCAGAAAGCTTTGATATGATTGAGGatgcATCTGTGACTGAGAAGGAGGATGTTTTCGGATTAGACGGGCAGATTGAACACAAGCTGGCCTTCCTACGAAAGCATGTGCCTCAGGGCACCAACTTGCTTCTGATTGGCCACTCTATTGGCTGCTATATCATCCTAGAGATGATGAAGAGAGACCCAGAACTAAAGGTTGTGAAGGCGGTGATGCTCTTCCCCACAATTGAGCGCATGGCCTGCAGTCCTCAAGGAAAAGTCATGACCCCTGTGCTCTGCCGCCTGCGATATGCCTTCTATTTGCCCATCTTCCTGCTCTCTCTCCTTCCAGAGAGGCTGAAAGTCGGCATAGTGCGTCTGGCCTTGAGGAATTTATATGCACTGGACAACTCCATCATCCCAGCCACCGTCAGCCTGATCAATGTAGACTGTGCTGCCAACGGTATGTACATGGGGAGCCAAGAAATGAGATTGGTTGTTGAAAGAGACAACGCAACCATACATCAACACCTCAGCAAGATTATTTTTTACTATGGAGCCACGGATCACTGGTGTCCAGTAAAGTATTGCCATGATATCAGGAAGGACTTTCCTGAAGGGGACATTCGACTATGTGAAAGAGGCATCCGGCATGCTTTCGTCCTGGATGCAGGGGAGGAAATGGCTAAAATGACAGCAGAGTGGATCTCAGATGACCTCAGGACGCTCTGACAGTGGctaaacatttagcattttaaccactTTAATGTCTGCAGGCTATAAATTGTACCTGGGCCCCCTATGAGTTTTTTAAGAACATTACTCATAGATTTATAAACACATATGTCTCTTTATCGATTGTTTCTATGGGCTGCTATACGTAAGCTTTCCAGCCTAGTATAATTATCAAAACATTGTCTGTGAGCACTTGACGAATCATTTCTTCCACTACACTCTCAGTA
>TCONS_00022976
AAGACCTGCATACCGCCAGCAAAGGCCCAAACTCTCCCAAAACACTCATTCTTGTCATTCCAGGTAACCCAGGTGTGGTGGGCTTCTACAAGACATACATGTGGACACTGTATCAGAAGTTTCTCCAGAGATATCCAGTGTGGGCTGTGAGCCATGCTGGACACTGTATGCCTCCAGAAAGCTTTGATATGATTGAGGCTGAatattcacagacacattctggggacaccgaAGACCACTAttatatcttgtaaaaaggggcgttataggtgccctttaaatcatcctgtttatatgaataaTCATCAAACTGAAGCATCACACAATTGCTCATTTATTGTGAACACGTGGACTACTTTTGACCAGAATCACAGTCTTAAAGTATTCAGTGACACGCAGCTGATCTCTGGCTCGCACAACAGATGATGATATCCGTTGCTGTTCATATCATGTCATGCAATCATGAGCTGAATGATTAAAAGTCAAAACTCAGCAGCGGATTCAAATGTGCCAAGAGATGACAAAAAGCGGCAGCCGTTTGCCAAAGCAGCCAAGATGAAAGAAGGGATGCAATTAAAAGTTATATTTCATTTCCTCAATATCGCTATTTGACTGACATTCTTGATTACCATCAGGGGGCTGAGGTATCAGATATGCTGGGCTTTTCTTTCCACGCCATATTGTCTTGTTCATCTCAATGATCCATCCCTCATCATGTTCTGCCATTTGGTTCGCAGATGCCCCTGTTTAAGGAAATAGCTGCTCGTGTTGCTTCTCAAGATGTAGCATATCAGGGTGTAATCAAGTAAAATCTGCTAAATAGATTCTAGAAACGTTGTTTTTATCA
>TCONS_00022977
ACTCAGAATACCATTGCATCTAAGTGGCTGGATTTACTCTACACTACAAGCTCCGTTCACATTCATTACAGAAGGTTGTGAAGGCGGTGATGCTCTTCCCCACAATTGAGCGCATGGCCTGCAGTCCTCAAGGAAAAGTCATGACCCCTGTGCTCTGCCGCCTGCGATATGCCTTCTATTTGCCCATCTTCCTGCTCTCTCTCCTTCCAGAGAGGCTGAAAGTCG

Function

symbol description
ldah Predicted to be involved in lipid storage. Predicted to be active in lipid droplet. Orthologous to human LDAH (lipid droplet associated hydrolase).

GO:

id name namespace
GO:0019915 lipid storage biological_process
GO:0005811 lipid droplet cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-178 Predicted to be involved in lipid storage. Predicted to be active in lipid droplet. Orthologous to human LDAH (lipid droplet associated hydrolase).

Ensembl:

ensembl_id ENSDARG00000079796

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022975 False 1361 mRNA 0.46 7 30749251 30817230
TCONS_00022976 False 847 mRNA 0.42 3 30751462 30771951
TCONS_00022977 True 225 processed_transcript 0.50 2 30796873 30797919

Neighbor

gene id symbol gene type direction distance location
XLOC_011529 NA coding upstream 4079 30744729 ~ 30745172 (+)
XLOC_011528 apoba coding upstream 21285 30704068 ~ 30727966 (+)
XLOC_011527 si:dkey-190l8.2 coding upstream 143517 30591287 ~ 30605734 (+)
XLOC_011526 nhsl1a coding upstream 158028 30522764 ~ 30591223 (+)
XLOC_011525 CR628334.1 coding upstream 252411 30496724 ~ 30496840 (+)
XLOC_011531 tpp1 coding downstream 26651 30843881 ~ 30855792 (+)
XLOC_011532 degs2 coding downstream 77201 30894431 ~ 30900380 (+)
XLOC_011533 BX571712.3 coding downstream 307925 31125155 ~ 31127838 (+)
XLOC_011534 disp2 coding downstream 368046 31185276 ~ 31202280 (+)
XLOC_011535 ccdc32 coding downstream 404531 31221761 ~ 31228971 (+)
XLOC_011521 CT027582.1 non-coding upstream 1020508 29723351 ~ 29728743 (+)
XLOC_011517 NA non-coding upstream 1671409 29021960 ~ 29077842 (+)
XLOC_011515 NA non-coding upstream 1916539 28822373 ~ 28832712 (+)
XLOC_011538 NA non-coding downstream 753783 31571013 ~ 31571489 (+)
XLOC_011547 CT573453.1 non-coding downstream 1252028 32069258 ~ 32069372 (+)
XLOC_011548 NA non-coding downstream 1285676 32102906 ~ 32112037 (+)
XLOC_011552 NA non-coding downstream 1547878 32365108 ~ 32527320 (+)

Expression


Co-expression Network