XLOC_011548


Basic Information

Item Value
gene id XLOC_011548
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 32102906 ~ 32112037 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024704
GCGAGACTTACAGTGGGAGCCAGTGCTCTGATGAGCAGCGCTACAGCACATCTCTGAGTAAAGAAAGCTTTCAGGCTGGGCTACAGCAAATCAGCCTGCTCTCCTGGGATGTGGGGAATGAGCTGAGAGGTGCCCACACAGGGAGACCCACAGACTGAAAGATAGTGAAGGAACAGAGCGACAATTTGGCTAAAAGGGAGTGTGTAGCACCAGTAAGCTGCCAGGAAGCAAGACAGGTGTGGATTTGGTACAACTCtgaagcagCTTGAAATGAGACATGCGTTCAAACTTGCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024704 True 294 lncRNA 0.51 2 32102906 32112037

Neighbor

gene id symbol gene type direction distance location
XLOC_011547 CT573453.1 coding upstream 33534 32069258 ~ 32069372 (+)
XLOC_011546 INSYN2A coding upstream 95674 31914877 ~ 32007232 (+)
XLOC_011545 eef1akmt2 coding upstream 278936 31820401 ~ 31823970 (+)
XLOC_011544 arhgap5 coding upstream 304641 31739418 ~ 31798265 (+)
XLOC_011543 nubpl coding upstream 376038 31719034 ~ 31726868 (+)
XLOC_011549 adam12 coding downstream 46914 32158951 ~ 32334107 (+)
XLOC_011550 dhx32b coding downstream 231084 32343121 ~ 32360489 (+)
XLOC_011551 si:ch211-139d20.3 coding downstream 248636 32360673 ~ 32364957 (+)
XLOC_011552 NA coding downstream 253071 32365108 ~ 32527320 (+)
XLOC_011553 NA coding downstream 310562 32422599 ~ 32423550 (+)
XLOC_011538 NA non-coding upstream 531417 31571013 ~ 31571489 (+)
XLOC_011533 BX571712.3 non-coding upstream 975068 31125155 ~ 31127838 (+)
XLOC_011529 NA non-coding upstream 1357734 30744729 ~ 30745172 (+)
XLOC_011525 CR628334.1 non-coding upstream 1606066 30496724 ~ 30496840 (+)
XLOC_011554 CR627496.2 non-coding downstream 344766 32456803 ~ 32456919 (+)
XLOC_011555 NA non-coding downstream 358635 32470672 ~ 32497173 (+)
XLOC_011559 BX936381.1 non-coding downstream 540344 32652381 ~ 32652505 (+)

Expression


Co-expression Network