XLOC_011549 (adam12)


Basic Information

Item Value
gene id XLOC_011549
gene name adam12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 32158951 ~ 32334107 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023005
TGGAGATTTCAAGCAGCGctcttccaaaaaataaaaataaaaatcaacaccTAAAGCACGAGACCAAAGCACGTCTGTCCACATCTGTCCGTGCGCTTTTCCCTTTCCTTCACAACTCTCCTCCCGCGACTCAGGACAGTGTGAACACAGTCGAGCGCGAGACTTCACCACTGTTGGCTTTGTAAAGTTTCTCTGACTCTGACATCTCTTTGTCGGGTCTGTTCCCTCCCTCCCCTCGATCCCCTGTGGATTTAATCGTATTGCAGGAAGTCCCTCACATCCTCTCCTCCTGCGCTGTGAGCGCGCGTGTGtatttgagtgagtgagtgtgttttcTGTCGGTATATTATGAAGATTTGATCATAAGGAGCCGGGCATCATGAGGATCCACCGGCGCATGGAGAGCTGGTACCTCATGAACGGACTGCGCGCTTTTGTGCTGCTGGTAGTGGGACTGACAGCTGACATCTCCACTCATCACTCACCCGACGAGAGGCAACTAAGAAGTGTACTCACCAAACTGGAACACTACCACACCATGGTACCACTACTGCTGGAAGGAACAGAGCAGCGACCAATCAGCTGGCTCCGCTCCAGGacgCCTCCCGCTTCGCTGCACATCCTGATCCAAACAGAAGGACAACAGCTGATTTTATCTGTGGAAAAGAACCATGGACTGTTTGCCAGCCATTACACTGAGACACATTACAGGGAAGATGGACAAACTGTTACAAGCACTCACAACTCTACGATGAATTGCTATTACCATGGAGAAGTACAAGGATACGTACACTCTGAAGTCACTCTTAGTACTTGCTCTGGTATCAGAGGGTTCGTCTTACTTGAAAATAAAACACTGATGGTAGAGCCAGCTTTTGAGCCGGCAAACGACACCCATGTGATTTATGATGGACATCATCTACACTTCCCCTCCGGAACCTGTGGACACGGACACAACATATCGACTGTCAGCAACACGAACACAAGAGGACTGCTACAATCATTCAGAACGAGGCATAAACGGGATGTTCAGAAGACCACCAAATATGTGGAGCTCATCATTGTAGCAGACAACCGAGAGTTCCAAAAGCAAGGAAAAGATGTGGAAAAGGTTAAACAAAGGCTAGCGGAGATCGCCAATTACGTGGACAAGTTTTACAGAGTGCTGAACATCCGTGTAGCTCTGGTTGGACTGGAGGTGTGGAGTGATGTTGATAAGTGTTCAGTAACCCAAGACCCCTTTACAACCCTGCACGAGTTTTTGGACTGGAGGAAACTTAAGCTGCTACCTCAGCGGCCTCATGATAATGCTCAGCTCATAAGCGGGGTGTACTTCCAGGGCACCACAATAGGGATGGCTCCCATCATGAGTATGTGCACCGCTGAGCAGTCAGGAGGCATTGTCATGGACCACTCGGACAATGCTCTTGGAGCTGCTGTGACTCTGGCCCATGAGTTGGGCCATAACTTTGGAATGAACCACGACACGCCAGAGCGAGGCTGTGGCTGTAGGATGACCGTAGACCGTGGCGGATGCATCATGACCCCCTCTACAGGGTACCCGTTCCCCACAGTGTTCAGTACGTGCAGTAAGAAGGATCTGGTGGCCAGTCTGGAGAAGGGGGTCGGCATGTGTTTGTATAACATGCCTGAGGTCAAAATGCTCTACGGGGGACAGAAATGTGGCAACGGATACATTGAGGAAGGAGAGGAGTGTGACTGTGGAGAGCCGGAGGAGTGTCTGAACCCCTGCTGTAACGCGACAACCTGCACCCTAAAGGGAGATGCTGTTTGTGCACATGGCCAGTGCTGTGAAAACTGTCAGTTAAAACCAGCCGGGACTCCCTGTAGAGAGTCCAGTAACTCCTGTGATTTACCTGAGTTCTGCACTGGCACAAACCCTCACTGTCCTGCCAATGTGTACCTGCACGATGGCCATGCCTGCCACAATATGGATGGTTACTGCTACAACGGCATCTGCCAGACTCACGAGCAGCAGTGCATCACGCTCTGGGGACCAGgAGCAAAACCTGCCCCGGGGATCTGTTTTGAAAGAGTAAACTCTGCAGGTGATCCCTATGGAAATTGTGGAAAAGACGCTAAAGGCTCCTTCGCAAAATGTGAAGCAAGGGATGCCAGGTGTGGGAAGATTCAGTGCCAAGGAGGTGCTAACCGGCCAGTGATCGGAACCAATGCTGTTTCAATCGAGACGAATATACCTCTGCAGGAAGGAGGACGTCTTCTGTGCAGAGGAACACACGTGTACCTGGGGGACGACATGCCTGATCCTGGACTAGTGCTGGCTGGAACTAAGTGTGCTGAGggaaagATGTGTCTGAACCGACAGTGTCAGAATGTCAGTGTGTTTGGGGTGCACAAGTGCTCTGCCAAGTGCAATGGAAGAGGGGAATGCAACAATAAGAAGAACTGCCACTGTGAGGCTCACTGGGCACCTCCTTTCTGTGACAGGGCGGGGTTTGGCGGCAGCGTCGACAGTGGGCCAATGAGACAAGCTGCAgatgtgcgcgtgtgtgtattaATGTGCGTGTTGTCCTATGTGACAACAGCGGACAGCAGTGCCGTGGCCGTAGGTTCCCTGGTCACCCTGCTCTGCCTGCTGTCGGCCGGACTGATGCTGTGTCTGAAGAGGAAAGCGCTGGTTCAGTTCCTTTGCGCTAATAAGAAGAACGCCATTCAAAAGCTCAGATCAGTTGGACGAAAGCAAACACCCAGCCCTCCTCAGACACAGTCAGTCTTCAGGGTCTCACCTCAGCACAAGCCCCCTTCATTACCCTTACACTCCCGCGCAGACAAGatgtCTCATCCTAGTTCGGAGCCTCTTCTTCCTGCGCACAGTTTCCAGAGTTTGCGTCGTATGCCTGAATGTCCGAGCCGCTGCCAGCCTGTCCACATCAGCCACCCAATGCCCATCACGCTGCAGCCTCACAGGACACTGAGAGCGACAGTCGTCCACACGCTGCCACGTCACAtcgcatacacgcacacacagGATCACGACATGCCCAGTCCACCTCAGAAACCCCTTCCTGCACATCCCTTAATCAGAAGCCACGGGATGGGGCGAAATGTAAGGATACCCGCACCTCTGGCCATCCCGATTCCAACAGTACCACGACCCCCTCCCTCCATACCACTGCCCAACAGACCTCTGCCCAGATTACCACAGCCTTTTTATGATCACTGA
>TCONS_00023006
aaaatcaacaccTAAAGCACGAGACCAAAGCACGTCTGTCCACATCTGTCCGTGCGCTTTTCCCTTTCCTTCACAACTCTCCTCCCGCGACTCAGGACAGTGTGAACACAGTCGAGCGCGAGACTTCACCACTGTTGGCTTTGTAAAGTTTCTCTGACTCTGACATCTCTTTGTCGGGTCTGTTCCCTCCCTCCCCTCGATCCCCTGTGGATTTAATCGTATTGCAGGAAGTCCCTCACATCCTCTCCTCCTGCGCTGTGAGCGCGCGTGTGtatttgagtgagtgagtgtgttttcTGTCGGTATATTATGAAGATTTGATCATAAGGAGCCGGGCATCATGAGGATCCACCGGCGCATGGAGAGCTGGTACCTCATGAACGGACTGCGCGCTTTTGTGCTGCTGGTAGTGGGACTGACAGCTGACATCTCCACTCATCACTCACCCGACGAGAGGCAACTAAGAAGTGTACTCACCAAACTGGAACACTACCACACCATGGTACCACTACTGCTGGAAGGAACAGAGCAGCGACCAATCAGCTGGCTCCGCTCCAGGacgCCTCCCGCTTCGCTGCACATCCTGATCCAAACAGAAGGACAACAGCTGATTTTATCTGTGGAAAAGAACCATGGACTGTTTGCCAGCCATTACACTGAGACACATTACAGGGAAGATGGACAAACTGTTACAAGCACTCACAACTCTACGATGAATTGCTATTACCATGGAGAAGTACAAGGATACGTACACTCTGAAGTCACTCTTAGTACTTGCTCTGGTATCAGAGGGTTCGTCTTACTTGAAAATAAAACACTGATGGTAGAGCCAGCTTTTGAGCCGGCAAACGACACCCATGTGATTTATGATGGACATCATCTACACTTCCCCTCCGGAACCTGTGGACACGGACACAACATATCGACTGTCAGCAACACGAACACAAGAGGACTGCTACAATCATTCAGAACGAGGCATAAACGGGATGTTCAGAAGACCACCAAATATGTGGAGCTCATCATTGTAGCAGACAACCGAGAGTTCCAAAAGCAAGGAAAAGATGTGGAAAAGGTTAAACAAAGGCTAGCGGAGATCGCCAATTACGTGGACAAGTTTTACAGAGTGCTGAACATCCGTGTAGCTCTGGTTGGACTGGAGGTGTGGAGTGATGTTGATAAGTGTTCAGTAACCCAAGACCCCTTTACAACCCTGCACGAGTTTTTGGACTGGAGGAAACTTAAGCTGCTACCTCAGCGGCCTCATGATAATGCTCAGCTCATAAGCGGGGTGTACTTCCAGGGCACCACAATAGGGATGGCTCCCATCATGAGTATGTGCACCGCTGAGCAGTCAGGAGGCATTGTCATGGACCACTCGGACAATGCTCTTGGAGCTGCTGTGACTCTGGCCCATGAGTTGGGCCATAACTTTGGAATGAACCACGACACGCCAGAGCGAGGCTGTGGCTGTAGGATGACCGTAGACCGTGGCGGATGCATCATGACCCCCTCTACAGGGTACCCGTTCCCCACAGTGTTCAGTACGTGCAGTAAGAAGGATCTGGTGGCCAGTCTGGAGAAGGGGGTCGGCATGTGTTTGTATAACATGCCTGAGGTCAAAATGCTCTACGGGGGACAGAAATGTGGCAACGGATACATTGAGGAAGGAGAGGAGTGTGACTGTGGAGAGCCGGAGGAGTGTCTGAACCCCTGCTGTAACGCGACAACCTGCACCCTAAAGGGAGATGCTGTTTGTGCACATGGCCAGTGCTGTGAAAACTGTCAGTTAAAACCAGCCGGGACTCCCTGTAGAGAGTCCAGTAACTCCTGTGATTTACCTGAGTTCTGCACTGGCACAAACCCTCACTGTCCTGCCAATGTGTACCTGCACGATGGCCATGCCTGCCACAATATGGATGGTTACTGCTACAACGGCATCTGCCAGACTCACGAGCAGCAGTGCATCACGCTCTGGGGACCAGgAGCAAAACCTGCCCCGGGGATCTGTTTTGAAAGAGTAAACTCTGCAGGTGATCCCTATGGAAATTGTGGAAAAGACGCTAAAGGCTCCTTCGCAAAATGTGAAGCAAGGGATGCCAGGTGTGGGAAGATTCAGTGCCAAGGAGGTGCTAACCGGCCAGTGATCGGAACCAATGCTGTTTCAATCGAGACGAATATACCTCTGCAGGAAGGAGGACGTCTTCTGTGCAGAGGAACACACGTGTACCTGGGGGACGACATGCCTGATCCTGGACTAGTGCTGGCTGGAACTAAGTGTGCTGAGggaaagATGTGTCTGAACCGACAGTGTCAGAATGTCAGTGTGTTTGGGGTGCACAAGTGCTCTGCCAAGTGCAATGGAAGAGGGGAATGCAACAATAAGAAGAACTGCCACTGTGAGGCTCACTGGGCACCTCCTTTCTGTGACAGGGCGGGGTTTGGCGGCAGCGTCGACAGTGGGCCAATGAGACAAGCTGCGGACAGCAGTGCCGTGGCCGTAGGTTCCCTGGTCACCCTGCTCTGCCTGCTGTCGGCCGGACTGATGCTGTGTCTGAAGAGGAAAGCGCTGGTTCAGTTCCTTTGCGCTAATAAGAAGAACGCCATTCAAAAGCTCAGATCAGTTGGACGAAAGCAAACACCCAGCCCTCCTCAGACACAGTCAGTCTTCAGGGTCTCACCTCAGCACAAGCCCCCTTCATTACCCTTACACTCCCGCGCAGACAAGatgtCTCATCCTAGTTCGGAGCCTCTTCTTCCTGCGCACAGTTTCCAGAGTTTGCGTCGTATGCCTGAATGTCCGAGCCGCTGCCAGCCTGTCCACATCAGCCACCCAATGCCCATCACGCTGCAGCCTCACAGGACACTGAGAGCGACAGTCGTCCACACGCTGCCACGTCACAtcgcatacacgcacacacagGATCACGACATGCCCAGTCCACCTCAGAAACCCCTTCCTGCACATCCCTTAATCAGAAGCCACGGGATGGGGCGAAATGTAAGGATACCCGCACCTCTGGCCATCCCGATTCCAACAGTACCACGACCCCCTCCCTCCATACCACTGCCCAACAGACCTCTGCCCAGATTACCACAGCCTTTTTATGATCACTGACATATGAACACCAGAGCACTGGGTGAACCTCACCAGCATCTGAACACACTTGTTTTGCACTATGAAACTCTGTTGGACGATGTGACCCCCCTGCAGAGAAGAGGCTGACCGGACACCTTGGTGCTGCgcctcctcaaaaaaaaaaagaaaaaaagaaaggtgTTCGTCTGTCCTCGCTCAGGTACTGCACAACTATTTAAGATGTATATTTATTGTGAGGAGGAAACGATGTGCTGTGCTCGACACATTTTTTTACTGTATGATCATTGTGACTTTTATTGCAATCTTTCTGATggtttttacactttaaaaaaaatgatgatttGAATTTAGGTTACAAATCATGTGTTTCTTCCGTGTTTTTATAGTGTTTTCTTGTTCTTCTAAGTTTATAGACGGCCATTCACACCAAGGATGATAACTATAAGATGATTATATTAATTATCACATCAACAGacagtattgtttttatattttaggcATGCATTATTGTCGGGTTATCTTCAGTATATTAAGAAGTAATTCCTATTGTGTaataagcgattagttgactacttaaaaatgtgagtaaatctgttgccttaaaattaagttaattaactatgtacataattataaaaataaagtcaatttaatagtTCCAAGTTTACCCATTTTTtttagtaaagtcaacttgttgttTTTAAGGCAAAGGTTTTACACActctttttaagtaaagtaatttatttttgcacaacatattctgaaaacatagctccATATAtctttctggagattgtgaattatgcagccagagatacagtacagaccaaaagtttggacacaccttctcattcaaagagttttctttattttcatgactattaaaattctagattcacaatGAAGGCATCAAAACTATGAATTAACTCATGTAGAATTATATACAtaacaaaaaaagtgtgaaacaATTGAAAATCTGTCATATTCTAGGTTCTTCACAGTAGCCACCTTTTGGTTATTGCTTTGTACACTCTTGGCACCTGAAATGGTTTTCACTTCACTGGTGTTCCCTGTCAGGTTAAATAAGTGGGATTTCTTGCCTTACAAATGGGGTTGGGACCATCAATTGTGCAGAAGTCAATACACAGCTGATAGTACTGAATAGACTGTTAGAATTTGTATTATGGCAAGAAAAAAGCAGCTAAGTAAAGAAAAACGAGTGGCCATCATTACTTTGAACGTGTCCCCAAGTGCAGTCAGTAAAACGATCAAGCGCTACAAAGAAACTGGCTCACATGCGGATCGCCCCAGGAAAGGAAGACCAAGAGTCACCTCTGCTGCGCAGGATAAGTTCATTTCTGCATTTCGTCTTTCAAATGAATGCTCAGTATGATGGTAT
>TCONS_00023007
CGACATGCCTGATCCTGGACTAGTGCTGGCTGGAACTAAGTGTGCTGAGggaaagATGTGTCTGAACCGACAGTGTCAGAATGTCAGTGTGTTTGGGGTGCACAAGTGCTCTGCCAAGTGCAATGGAAGAGGGGTAAtcaaataaaTTGAAAATCTAATTTTTGAAAACTTGATCCACAGATCAGTTGGACGAAAGCAAACACCCAGCCCTCCTCAGACACAGTCAGTCTTCAGGGTCTCACCTCAGCACAAGCCCCCTTCATTACCCTTACACTCCCGCGCAGACAAGatgtCTCATCCTAGTTCGGAGCCTCTTCTTCCTGCGCACAGTTTCCAGAGTTTGCGTCGTATGCCTGAATGTCCGAGCCGCTGCCAGCCTGTCCACATCAGCCACCCAATGCCCATCACGCTGCAGCCTCACAGGACACTGAGAGCGACAGTCGTCCACACGCTGCCACGTCACAtcgcatacacgcacacacagCCGCAGATGAACTGAAGAACAGCAGCATAGTGGCAGACAGAGTGAACGCAGGACTGAAAGTGATACGGAGAGATGTCTGTGTGTGAAGGTATGCGTTTTAGATGATAAGTGCAGCTCAGGGACACTGGAAGATCAGCTATCAGACGCCATGAAGAACAACATCTGCTGCTCCACTTCATTGTGTTCGAGTCAACTGACTGAGCTTCAGTCCAGCTGCACCTCTGATGCTTTGTTATAGAAGTGCCATATAGCTAGTGTTATGATAACTTATCGTACTCTGAAATAGCACACACAAATAATAGATACTAAATGCTATACTAGAAGTAATCTAGATCCTCTTTTTAAAGGCCTTAAAGTCCATGTAAAATCCAAATTTttgatgtttattttgctagcgctcATTGTTATTC

Function

symbol description
adam12 Enables SH3 domain binding activity. Involved in positive regulation of angiogenesis. Located in nucleoplasm and plasma membrane. Implicated in osteoarthritis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

Ensembl:

ensembl_id ENSDARG00000079068

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023005 False 3205 mRNA 0.52 23 32158951 32332725
TCONS_00023006 False 4497 mRNA 0.47 23 32158990 32334107
TCONS_00023007 True 894 nonsense_mediated_decay 0.47 5 32305683 32324919

Neighbor

gene id symbol gene type direction distance location
XLOC_011548 NA coding upstream 46914 32102906 ~ 32112037 (+)
XLOC_011547 CT573453.1 coding upstream 89579 32069258 ~ 32069372 (+)
XLOC_011546 INSYN2A coding upstream 151719 31914877 ~ 32007232 (+)
XLOC_011545 eef1akmt2 coding upstream 334981 31820401 ~ 31823970 (+)
XLOC_011544 arhgap5 coding upstream 360686 31739418 ~ 31798265 (+)
XLOC_011550 dhx32b coding downstream 9014 32343121 ~ 32360489 (+)
XLOC_011551 si:ch211-139d20.3 coding downstream 26566 32360673 ~ 32364957 (+)
XLOC_011552 NA coding downstream 31001 32365108 ~ 32527320 (+)
XLOC_011553 NA coding downstream 88492 32422599 ~ 32423550 (+)
XLOC_011554 CR627496.2 coding downstream 122696 32456803 ~ 32456919 (+)
XLOC_011538 NA non-coding upstream 587462 31571013 ~ 31571489 (+)
XLOC_011533 BX571712.3 non-coding upstream 1031113 31125155 ~ 31127838 (+)
XLOC_011529 NA non-coding upstream 1413779 30744729 ~ 30745172 (+)
XLOC_011555 NA non-coding downstream 136565 32470672 ~ 32497173 (+)
XLOC_011559 BX936381.1 non-coding downstream 318274 32652381 ~ 32652505 (+)

Expression


Co-expression Network