XLOC_011553



Basic Information


Item Value
gene id XLOC_011553
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 32422599 ~ 32423550 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024708
CTGGGGAAAGCAAACAAACTCTGTTAATCATACAGCAGACCCAGAGCCGCAGCGCTGTCCTCGTCTCCATTAATGCTCATCATGGCTTTGGTGGCGGCTGTGAGCGGATTCTCCAGGAACGACTTCCAGGCCTCATCCTCACTGGTGTAAGGCCGCCGCTGGTTGTACGCAGGATCATTGGGCAGCACGAGCACTGCCCGCTTACTGTAAGGAACATTCACAAACCGCCATCAATACTACGACGACAACAGCGAAATGAATCTTCAGGCAGGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024708 True 273 lncRNA 0.54 2 32422599 32423550

Neighbor


gene id symbol gene type direction distance location
XLOC_011551 si:ch211-139d20.3 coding upstream 57642 32360673 ~ 32364957 (+)
XLOC_011550 dhx32b coding upstream 62110 32343121 ~ 32360489 (+)
XLOC_011549 adam12 coding upstream 88492 32158951 ~ 32334107 (+)
XLOC_011548 NA coding upstream 310562 32102906 ~ 32112037 (+)
XLOC_011547 CT573453.1 coding upstream 353227 32069258 ~ 32069372 (+)
XLOC_011554 CR627496.2 coding downstream 33253 32456803 ~ 32456919 (+)
XLOC_011555 NA coding downstream 47122 32470672 ~ 32497173 (+)
XLOC_011556 gcfc2 coding downstream 108304 32531854 ~ 32551256 (+)
XLOC_011557 eva1a coding downstream 148034 32571584 ~ 32608521 (+)
XLOC_011558 ctsba coding downstream 199381 32622931 ~ 32631514 (+)
XLOC_011538 NA non-coding upstream 851110 31571013 ~ 31571489 (+)
XLOC_011533 BX571712.3 non-coding upstream 1294761 31125155 ~ 31127838 (+)
XLOC_011529 NA non-coding upstream 1677427 30744729 ~ 30745172 (+)
XLOC_011559 BX936381.1 non-coding downstream 228831 32652381 ~ 32652505 (+)
XLOC_011560 BX936381.2 non-coding downstream 278155 32701705 ~ 32701821 (+)
XLOC_011561 NA non-coding downstream 292647 32716197 ~ 32716792 (+)

Expression



Co-expression Network