XLOC_011561



Basic Information


Item Value
gene id XLOC_011561
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 32716197 ~ 32716792 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024473
ctGACCCCAAACTAATTGACAGATATATATTTACGTTTAAACCATTAAATATGGAGTTTTAAATGGATGATAGAAGTCCAATATAACGAACAGCAGGCTTTCAatttagtaaaaacaaacaaacaatttatgCTCTCAGGGTCAGAAAGGGTTAAAGATGCTTTCCACAAAACACTGCTGTTTTATGCAGGTAATATCAATATAGTACAGTCAGATCAAGTAGTGCGTTTTCATTAGCCTGGAAAACTGTATTGATTTGTCACCTAGCCATTTTATATACTGGCAGCTCAGCAGTCATCTGATCTAAGTCTTTGAATAGCTTAAAGTTTAGGGACCTTATTGACGTCACATCAGTGTTTTCACTGCATTTTCTTTCCCTAATAGACTGCACATGTATAGTTATCACAGATTGTAAGCGGATTAACTCAAAGTGTTTTTTAAGTCCTCTCAGCAGAGTCAGCAGTCAGTCATATAATGGAATTTTCTTCAGGTTTATAGCACAATGATTTTCATAAGTAGAATAGCCTGTTGTTTTAtcattagatttaaaaaaataaatattttcatgcGCTTTCagtttaaaagttaaatttttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024473 True 596 lncRNA 0.33 1 32716197 32716792

Neighbor


gene id symbol gene type direction distance location
XLOC_011560 BX936381.2 coding upstream 14376 32701705 ~ 32701821 (+)
XLOC_011559 BX936381.1 coding upstream 63692 32652381 ~ 32652505 (+)
XLOC_011558 ctsba coding upstream 84683 32622931 ~ 32631514 (+)
XLOC_011557 eva1a coding upstream 107676 32571584 ~ 32608521 (+)
XLOC_011556 gcfc2 coding upstream 164941 32531854 ~ 32551256 (+)
XLOC_011562 NA coding downstream 63910 32780702 ~ 32870816 (+)
XLOC_011563 NA coding downstream 385711 33102503 ~ 33111166 (+)
XLOC_011564 NA coding downstream 401746 33118538 ~ 33120510 (+)
XLOC_011565 NA coding downstream 403788 33120580 ~ 33121796 (+)
XLOC_011566 snx9a coding downstream 441502 33158294 ~ 33201840 (+)
XLOC_011552 NA non-coding upstream 188877 32365108 ~ 32527320 (+)
XLOC_011569 BX323819.1 non-coding downstream 581556 33298348 ~ 33298470 (+)

Expression



Co-expression Network