XLOC_011564


Basic Information

Item Value
gene id XLOC_011564
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 33118538 ~ 33120510 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024475
CAATTTGCTTCTAATCAACCATACATTCCTTTACATCTCTTTCAGAGCGACTGGGCCAGTGCAGAGGGTTCTATTTTCACTCAAGGCCTACAGTGAGGGCTCATTTTGGCTGTTGATCTGCAGTGGCCTGGTTACGCCGTGGTGGATGCCCTAAAGGCAGCTCCAGTCCCAAGGCAGGCACTCATCTGCGCCCTCCCTCCGCCCCAGCCTCCACCGGTCCCCCAGAGGCGGCGCTGATGGCATCTGGCCGGCGTCCAGCCAGCGCGGGAAAGATGGCACGGAGCTGCCATTAAAATCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024475 True 298 lncRNA 0.58 2 33118538 33120510

Neighbor

gene id symbol gene type direction distance location
XLOC_011563 NA coding upstream 7372 33102503 ~ 33111166 (+)
XLOC_011562 NA coding upstream 247722 32780702 ~ 32870816 (+)
XLOC_011561 NA coding upstream 401746 32716197 ~ 32716792 (+)
XLOC_011560 BX936381.2 coding upstream 416717 32701705 ~ 32701821 (+)
XLOC_011559 BX936381.1 coding upstream 466033 32652381 ~ 32652505 (+)
XLOC_011565 NA coding downstream 70 33120580 ~ 33121796 (+)
XLOC_011566 snx9a coding downstream 37784 33158294 ~ 33201840 (+)
XLOC_011567 pomca coding downstream 106445 33226955 ~ 33230039 (+)
XLOC_011568 dnajc27 coding downstream 175926 33296436 ~ 33309689 (+)
XLOC_011569 BX323819.1 coding downstream 177838 33298348 ~ 33298470 (+)
XLOC_011577 BX957235.1 non-coding downstream 464836 33585346 ~ 33585462 (+)
XLOC_011582 NA non-coding downstream 1148610 34269120 ~ 34287056 (+)
XLOC_011583 NA non-coding downstream 1513588 34634098 ~ 34675436 (+)

Expression


Co-expression Network