CI01000140_01582537_01630093



Basic Information


Item Value
gene id CI01000140_01582537_01630093
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000140
NCBI id null
chromosome length 2494207
location 1582383 ~ 1630396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000140_01582537_01630093.mRNA
TTATATATACACATACCGCTCAATTAATACTCCTCACGGAGCAGGAATATCCATGAACAGTATTTCACCACATATATATGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATTAAAAAATGACCAATCATTTCACACAGGATAAGGAAGGATCAGCACCTGCATTACGATCGTGGGGCTCGCAAATGGATCTCGCTGACGAACGGGAGACGGGTCCTGCCCTTTCGCCCAATTTGTCACCTGATCCACGCGTCTCCTCACGCAATCCTGAAGCGCACTCCGGTGCTTCTTCAGCTCACACAGGGGACGATGATTCTCTTCTCAAGTTTGTTGCCTCTGAGCGTTCCTCACGTGATGATAAAGCCGCTGAGGAATTACTCGAGGTAGTAACTCGAGCTGTGGCTAGATTACAGCTAGACTGGCCACAGGAAAAAGAGACCCCCAAACCATCTAAGCTTGAGGATAGGTTTTTGTCTGGTGGCAGAGGGGAGGGGCCACAACGCCAGTCTCTCCCCTTCTTTGAGGACCTCCATGACGAGTTATCAAAGTCATGGAAAAAGCCATATACTTCCCGTGGTTTTGTGCCCTCGACATTGATTTATTCGACTATTTGGGTGAAGAGGAGGAGGATCCCAAATACGGTGGTCCTGGACCTAGCACTCATTGACCTACATATTCTGGAATGGACTCCTGCCTATTCTCTCAACCTTGAGCTCTCTTCTTCTCCACCGGTCCCACCAGGCCTACTGGACTTTCTGGTTCCAAATAGTTCCCTAGCCCTCCTTCCTCTGCTGGTCCCGTCCAGCCTCCTGGCTCCTTTGTCTCCGCTGGTCCCGTCCATCCTCCAAGCTCCTGCATTACAACCATGGAGGTCATGCAAAGCCCCGTCGTCCTCACAAGAGGCCTTATTAGAGCCTACCCTAGTAAACACATGGCATCAGCCAGTCCAAGACCATACCAACCATCAGGCCATGCATTCAGTGAAAAACCTTTCACGCATAATACTGAGAGAAGGAATGCATATTACACCACCATACTCCACGAAAGGCCTGCTTAAGGCCTACTCAACAGAGGCATATGTAGACTTGACTTTGTGTGTGAAGATCAAATCTATGTGGCTGCATTTCACTGTGGCTATGTGTAAATGCAATCATGCTCCAAACAAAGGGAGCCAGCAGGAGAATGTGGGTATGAGGTGTGCTCTGGCTCAAAATCTTTTCACACCAAAGTTTTTGTTAAGGAGCATGATAAAGTGCAAAGTTCAGAGTTACTGAATCCTGTTGTGAGGAAAGCATTTTCATGGTTAATGCAATTGTAAATCACATTGTAGCCACATGGCAATTCTGTGCTCCTGTACATGGTTTTACTCCAGCTATATGGAAAATAGCAGAGTGTTCCATTTAGGAGACAAATTCAACATAGTCACACATGCAACTTGAAATTGCTATACAATTCCAGTACTACACTTATTATTCCAATTAACACAAGATACATAGCCTAGAATGCATAACATCTACAACCTTTAACCTAAGTGTTTCAAACAACACTTACAGTAAAGCAATCATGTGTTTTAAATA

Function


NR:

description
hypothetical protein cypCar_00027925

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000140_01582537_01630093.mRNA True 1612 mRNA 0.44 6 1582383 1630396
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000140_01550712_01553934 NA coding upstream 28216 1550712 ~ 1554167 (+)
CI01000140_01536330_01540225 NA coding upstream 42003 1535269 ~ 1540380 (+)
CI01000140_01186591_01191455 NA coding upstream 390339 1186398 ~ 1192044 (+)
CI01000140_01106090_01106567 NA coding upstream 475728 1106090 ~ 1106655 (+)
CI01000140_01058442_01103457 NA coding upstream 478926 1058191 ~ 1103457 (+)
CI01000140_01688652_01717386 NA coding downstream 56550 1686946 ~ 1718419 (+)
CI01000140_01807220_01815038 NA coding downstream 175303 1805699 ~ 1815769 (+)
CI01000140_01885335_01887127 NA coding downstream 254862 1885258 ~ 1887752 (+)
CI01000140_01948258_01949562 NA coding downstream 317862 1948258 ~ 1950091 (+)
CI01000140_02075636_02092672 NA coding downstream 444290 2074686 ~ 2093068 (+)
G350899 NA non-coding upstream 22145 1557532 ~ 1560238 (+)
G350835 NA non-coding upstream 124365 1456535 ~ 1458018 (+)
G350833 NA non-coding upstream 128741 1451623 ~ 1453642 (+)
G350828 NA non-coding upstream 178815 1403313 ~ 1403568 (+)
G350850 NA non-coding downstream 148271 1778667 ~ 1781774 (+)
G350847 NA non-coding downstream 191380 1821776 ~ 1826782 (+)
G350830 NA non-coding downstream 278223 1908619 ~ 1969478 (+)
G350831 NA non-coding downstream 346749 1977145 ~ 1979294 (+)
G350836 NA non-coding downstream 356060 1986456 ~ 1988053 (+)
G350848 NA other upstream 6264 1569266 ~ 1576119 (+)
G350901 NA other upstream 57211 1515978 ~ 1525172 (+)
G350832 NA other upstream 74675 1504386 ~ 1507708 (+)
G350762 NA other upstream 541575 1039556 ~ 1040808 (+)

Expression


CI01000140_01582537_01630093 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.3.
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CI01000140_01582537_01630093 Expression in each Bioproject

Bar chart with 39 bars.
CI01000140_01582537_01630093 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network