CI01000140_01807220_01815038



Basic Information


Item Value
gene id CI01000140_01807220_01815038
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000140
NCBI id null
chromosome length 2494207
location 1805699 ~ 1815769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000140_01807220_01815038.mRNA
ATATAAAAACCTGTTATGAATTTACCCAATTAATGATTAGATTCACATTAAACCAGAATTTTATCTAAATTAAATATTGTTTAATAAAAAAAAGAAGCAGCGTCATCTGGTGGACAAAGTATGGATATGCAACTACACAACCAAACAGACATTAAAGAGGAACAGATAATTAAATATCAATTATTATTTTAGCTTTACAATAATGAATAGGTAGAAAAATAGTAAGTAAAAAGTCCACTTTCAAATAAAAATTTCCTGATAATTTACTCACGCCCATGTCATCCAAGATGTCCAATTCCTTCTTTTTTCAGTGAAAAAGAAATTAAGGTTTTTGATTAAAACATTCCAGGATTATTCTCCTTATAGTGGACTTCAATGGCCTCCAAACTGTTGAAGGTCAAAATGACAGTTTCAGTGCAGCTTCAAAGGGCTTTAAACGATACCAAACGAGGAATAAGGGTCTTATCTAGCAAACGATCAGTCATTTTCGTATATATTTTATATAAACAGATGATCGCATCACAAGTGCTTCCACCAGAACGCGATTCGATATTCTTCAAAAAGCTTACGCTAAATGTCCTACGCCTTCCCCATTCAACTTATGGAATGAATGCGGCGCCAGTTCCGTTTTTTTCCGTAAGTATGAGTGTGCTTGAATTTTAAATGCAAGCTGGAAAATAGCTAAATATGCTGTTGGTATAAACAACTGTAAACTGAATACATCTATTTGTAATGTACATTTTTTGTAAATGTTTTTACATGTCTTTACACAAATATTTAAAACACCTTGCTTTTCTCTTGTAGGATGAACCGGCTGCCAGTGAAAGCAAGCCTGATGACCTAAATATCAGCATGCTTTCATTAGATCCACCATCTGAAAAAAAGGATGTTAGTTTTGTTCCACTTAGTTCCACATCTGACTCCATTACAACCACTAGGACAGAAGAAGAGGAGGAACATCCATGGCAAGAACGGAAATGGATTGTTAATGAATCAGCACTGATGAAACAATTTAGAAGATGTCAAGACTGTGGCGCACTGATCACAGGAAAAAAAAAACCACAACTTCAGGGAGCCTAATCAGTGTTCTTTGGGAATGTGAACAAGGACAGAAGTGGCAGTGAAATTCATGTCCTGATGTGCGTGGAATTCCATCAAACAACCTTCTAGTGTCAGTAGGTACTGTGATAACGGGGTCCACGTATGCAGGAATCTCTGAATGGGCTGCTGTGCTTAATCTTCAAGTACCACACAAAACAACTTTTTATGCAATTCAGTCTTCTTACCTCATACCTGCAATTGATGAGGTATTCAAAGAACAACAGACAGCCTTACTGGAACATTTGAAGGCAGGAAGCACAGAAAAAAAAGGAAATACATTTATCTGGAGATGGAAGATCAGACAGGTAATTTTTCATGTGAATGGTGAATTTTTATGTGAAATTATGTTATCTTTAAAGGGTTTCTGTTATATCTCAATGCTGTCCTGGATATTAGGCAAAGTACACCACATACAGCTTGATGGATGACAATACAGACAAAGTGGTACACTTTGAGCTGGTGCAAGTTACAGAGTCATCAAGCTCTGTAGCAATGGAGTCGACTGGTTTCAGGAGAGCACTCAGCAAAATCCTAGATGACAATATTGGATCTCCGAAAAAAGATGACAACAAGCGAACTATCTCATTCCAGGCCAGCATGGAGACAACTTTTTCGGGAGCTGAGGTAACCCATCTCGGCTTGGTAACCACAAAAGTATCTTCCCTGGCTCTGTTTCTTGGACTGAGGTTTCTGCCCTTAAGGCCTTTACCCGGTGATTCCCCAAGTATATACTTGTATTGAGATGCTGCTGGATTTTCTCTGGGCTTTTTTCCCTGCCATTATTATAGGTAAATTAATTTAGGTAATTTCCACTCATATAGCACTGAAGCATTTTAGGTACTTTCCACTCATTATAGCATTTAAGTATTTTAGGTACTTTCCACTCATGTAGATTTAAGCATTTCTATGTTTAAGCATATATGGCATTATCTTAAAAGCAAGCAAATGAATATTTCTTTGAAACAGATAAATAGCAATGGGAACCTGTGTCCCACTTTATATTAGGCGGCCTTAACAACTATATAGTTACATTTAAGTGAATCATTTGATACAATGCACTTATTGTGAACATTTAGCAGTTTTTAAATTGTAATTACCTGCATATAATTACATTTATAATTACATTGTTGACCCTTCTCTTACACCTTAACCCACCCTTAAACCTACCCATACCACCAAACCTGTCATTAACTTTACCCATATTCCACCTCAATAGGAGCCAAAGTGTTTTAAAATACAATATGAACACAATAAGTGCATTGTTCTTATTTTTTTGATGTAAGTACATAGTAGTTAAGGCCACCTAATATAAAGTGGGACTGGAAGACCCCCAGACTCAAGAAGATATATTTACAGAGGACTAAACCGAAAAGTGGGATGTGTCTGCCTCATTTCCAGCTGTATTGCATGTAATATAAGAGCACTCTCATTTGGTTTACAGGAGGGGTCGATAGAGTGGTGTGATATGGAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000140_01807220_01815038.mRNA True 2573 mRNA 0.37 5 1805699 1815769
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Neighbor


gene id symbol gene type direction distance location
CI01000140_01688652_01717386 NA coding upstream 87280 1686946 ~ 1718419 (+)
CI01000140_01582537_01630093 NA coding upstream 175303 1582383 ~ 1630396 (+)
CI01000140_01550712_01553934 NA coding upstream 251532 1550712 ~ 1554167 (+)
CI01000140_01536330_01540225 NA coding upstream 265319 1535269 ~ 1540380 (+)
CI01000140_01186591_01191455 NA coding upstream 613655 1186398 ~ 1192044 (+)
CI01000140_01885335_01887127 NA coding downstream 69489 1885258 ~ 1887752 (+)
CI01000140_01948258_01949562 NA coding downstream 132489 1948258 ~ 1950091 (+)
CI01000140_02075636_02092672 NA coding downstream 258917 2074686 ~ 2093068 (+)
CI01000140_02121231_02124634 NA coding downstream 305462 2121231 ~ 2124639 (+)
CI01000140_02228806_02229324 NA coding downstream 412922 2228691 ~ 2229642 (+)
G350850 NA non-coding upstream 23925 1778667 ~ 1781774 (+)
G350899 NA non-coding upstream 245461 1557532 ~ 1560238 (+)
G350835 NA non-coding upstream 347681 1456535 ~ 1458018 (+)
G350833 NA non-coding upstream 352057 1451623 ~ 1453642 (+)
G350828 NA non-coding upstream 402131 1403313 ~ 1403568 (+)
G350847 NA non-coding downstream 6007 1821776 ~ 1826782 (+)
G350830 NA non-coding downstream 92850 1908619 ~ 1969478 (+)
G350831 NA non-coding downstream 161376 1977145 ~ 1979294 (+)
G350836 NA non-coding downstream 170687 1986456 ~ 1988053 (+)
G351046 NA non-coding downstream 173220 1988989 ~ 2021381 (+)
G350848 NA other upstream 229580 1569266 ~ 1576119 (+)
G350901 NA other upstream 280527 1515978 ~ 1525172 (+)
G350832 NA other upstream 297991 1504386 ~ 1507708 (+)
G350762 NA other upstream 764891 1039556 ~ 1040808 (+)

Expression


CI01000140_01807220_01815038 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.06.
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CI01000140_01807220_01815038 Expression in each Bioproject

Bar chart with 34 bars.
CI01000140_01807220_01815038 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1.5.
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Co-expression Network