CI01000140_01885335_01887127



Basic Information


Item Value
gene id CI01000140_01885335_01887127
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000140
NCBI id null
chromosome length 2494207
location 1885258 ~ 1887752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000140_01885335_01887127.mRNA
GATTAAAAGGGGTTAGGCCTTTGTGATATCAGCAGGTGACCATCTAGGATACCCCCACACTTTATGGCATAGCAGAAATGCCCTCAGCCAGGTTACAGTTTAAAAATGTCAGAACGACATTTACAACAAAAATCTTGACAGGATCTTTCGCACGATATTTATCATCTGATGCAAATGAATCGGATCTGTATTTTGACATAGGGTTAGAACTCACCTTAGACAAGTTTTTTGATGAGGCACTGCTGTTTGGAGAGATTTTCCAGAATATTGTTCATGAAGACCCCGATCACGAGACGTTCTGTGATCCTATCGTATCACATTTGCAAGCCAACGGAGATGTTAACGAATGTACCCTGTCCACGCCCATACGCGGGCATAAGCGACTTAGGGAGGTATACGGTGTATGTGAGCTACCCAGCAGTTCACGTTTAAGGACGTCAGAAGATAACGAACAAGATTACGAGGCTGATTTTGACGAGTCCAGCTTGGATGAGAGCGACCCAGGTCCTCCAATCGAGGTGCAACCTCTCTTCAATGAACGAGCCATCTCACGACTTAGTTACGGGATGATGAGTAAGGCCAACCGTAACTTTGAAAGAATATTAGACCTATGTCATTGCAGGAAAGAGGACGAACTTCCGATTGCGCTGCGATTTGAACCCCTCACCTACGTATGACGTCAGCCGACATACATACTGATATTTAATAGTAGCACACAAATTTTTCAAAATAAACAAATAAAACAAATAATAATAAAAACAAATAATCTATATATAAAAGAAATAAAAATGATTTATAATCTGGTGTAACAACATATCCCTGCTACATAAAGGCATTGAAGGTACTATATCTTGTGCGTTACTCACCCAAACTTGTCAACAAGTTACTTTACATGAATGTGAGTGCATTAGCAGGTAGTTGCTGAATCACAGGTGTTTGATTTAGGAGATGATGACTGCAGCCGGTGATGAGGCAGAAACCAGCACTTCCAGTGCAAGTAGACTTACTTTTTTATCTTATTTGCACTATACTGACAGACCTTTTTGAAAGATATTGGTTCACTTATGGCCTTTTTGTGCACTTGAGCTTAACTGAGGCTTGAGAGTTTGTAGACATTTAAGAGGCTGTTGTGTCGACCTTGATTTATTGCAATATTGTGTGAAAAAAAAATATGCCAGTGAAAATAATAAACTGTTGATTTATAAGATGAGAAATGATGTTTATTTTCTAAAATCAAAATAAAACTAAATTGTGTTTTTGTTTTGTACTTATACTTTTCTTTGTACTTTGTATGTCTATGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000140_01885335_01887127.mRNA True 1302 mRNA 0.38 6 1885258 1887752
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000140_01807220_01815038 NA coding upstream 69489 1805699 ~ 1815769 (+)
CI01000140_01688652_01717386 NA coding upstream 166839 1686946 ~ 1718419 (+)
CI01000140_01582537_01630093 NA coding upstream 254862 1582383 ~ 1630396 (+)
CI01000140_01550712_01553934 NA coding upstream 331091 1550712 ~ 1554167 (+)
CI01000140_01536330_01540225 NA coding upstream 344878 1535269 ~ 1540380 (+)
CI01000140_01948258_01949562 NA coding downstream 60506 1948258 ~ 1950091 (+)
CI01000140_02075636_02092672 NA coding downstream 186934 2074686 ~ 2093068 (+)
CI01000140_02121231_02124634 NA coding downstream 233479 2121231 ~ 2124639 (+)
CI01000140_02228806_02229324 NA coding downstream 340939 2228691 ~ 2229642 (+)
CI01000140_02283016_02291094 NA coding downstream 395224 2282976 ~ 2291420 (+)
G350847 NA non-coding upstream 58476 1821776 ~ 1826782 (+)
G350850 NA non-coding upstream 103484 1778667 ~ 1781774 (+)
G350899 NA non-coding upstream 325020 1557532 ~ 1560238 (+)
G350835 NA non-coding upstream 427240 1456535 ~ 1458018 (+)
G350833 NA non-coding upstream 431616 1451623 ~ 1453642 (+)
G350830 NA non-coding downstream 20867 1908619 ~ 1969478 (+)
G350831 NA non-coding downstream 89393 1977145 ~ 1979294 (+)
G350836 NA non-coding downstream 98704 1986456 ~ 1988053 (+)
G351046 NA non-coding downstream 101237 1988989 ~ 2021381 (+)
G351044 NA non-coding downstream 102242 1989994 ~ 2067751 (+)
G350848 NA other upstream 309139 1569266 ~ 1576119 (+)
G350901 NA other upstream 360086 1515978 ~ 1525172 (+)
G350832 NA other upstream 377550 1504386 ~ 1507708 (+)
G350762 NA other upstream 844450 1039556 ~ 1040808 (+)

Expression


CI01000140_01885335_01887127 Expression in PRJCA010000

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.1.
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CI01000140_01885335_01887127 Expression in each Bioproject

Bar chart with 32 bars.
CI01000140_01885335_01887127 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network