CI01000140_02228806_02229324



Basic Information


Item Value
gene id CI01000140_02228806_02229324
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000140
NCBI id null
chromosome length 2494207
location 2228691 ~ 2229642 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000140_02228806_02229324.mRNA
CTTTAAAAGGCAGCTCTGCACACCAAATAAGTCACTGTTTCCAGCAGAGCCACAGGAAGCTGCTTCAGAAACACTCGTCTTCTCCAGCCTCTCTCTCCTCGAATCTTCAATCAAAATGAACAGGATCATTGTTTTTAGCAAAGAGGCCTTCGAGGGCAGAACAGCTGAATTCAAGAACGATGTCCGCAACTTAGAAGAAAAGGGCTTCAACGACGTCATCTGCTCCATGAAAGTCATTGGCGCACCATGGGTAGCGTATTATGACAAGAATTTTGCTGGAAAGCAGCGGGTGTTTGAGGAAGGAGAGTACGCCACCCTTGATGACAAAGGCCAGTTTTCTTCCCTCAAGATGGTCACAGATGACCTGGACAACCCTGAAATCCAGCTGTTCGTGCACCCGAACTGTCATGGAAGAAGCGTGACCCTACGTGAAGAAACCAATCTTCAAGACATTGATTTCAGTGACGTAGCTTCTTCCCACAAAGTGAGCGGTGGTGTCTGGGTGCTATACGAGCACATCAGTCGTCAGGGTTCCCAGCGTATTTCTTTCCCTGGTGATAAAGTTCCCAGCTATTGTCCACTCTCCTTCAACGATGTGGCCAGCCATGTGCGCCCCTTGCTGCCGAAGCCATAGACAGCATCATTCAAAGTACGCTTTCTGCAGCTGAAGATGAACTGGAATCCTTTTGGAAAGAATGAGGCATGTGGTGGGGAATGATGGATCATGACAAGAAACTTAATTTGACTCTTGACTGTGACGGCAATCAGTCTGAAGAAACTTCATGCAATCAGATTCAACCTTATAATTTGAGTATATCTGTGTAAAGACATACTGTACATGTTAACTTGGCAAATATATTATATAACAAGGATGAATTTTATTAGAAAAAGTTTTATGCTGCTGGTTGATTGGCTCATCATCAGTAGTGATCAGTATCAGTTAAAGTATGTA

Function


NR:

description
epidermal differentiation-specific protein, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000140_02228806_02229324.mRNA True 952 mRNA 0.44 1 2228691 2229642
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000140_02121231_02124634 NA coding upstream 104052 2121231 ~ 2124639 (+)
CI01000140_02075636_02092672 NA coding upstream 135623 2074686 ~ 2093068 (+)
CI01000140_01948258_01949562 NA coding upstream 278600 1948258 ~ 1950091 (+)
CI01000140_01885335_01887127 NA coding upstream 340939 1885258 ~ 1887752 (+)
CI01000140_01807220_01815038 NA coding upstream 412922 1805699 ~ 1815769 (+)
CI01000140_02283016_02291094 NA coding downstream 53334 2282976 ~ 2291420 (+)
CI01000140_02322058_02325171 NA coding downstream 92349 2321991 ~ 2325225 (+)
G351110 NA non-coding upstream 11236 2209109 ~ 2217455 (+)
G351048 NA non-coding upstream 44589 2107425 ~ 2184102 (+)
G351044 NA non-coding upstream 160940 1989994 ~ 2067751 (+)
G351046 NA non-coding upstream 207310 1988989 ~ 2021381 (+)
G351131 NA non-coding downstream 1283 2230925 ~ 2243732 (+)
G351176 NA non-coding downstream 131337 2360979 ~ 2361807 (+)
G351183 NA non-coding downstream 164936 2394578 ~ 2448529 (+)
G351188 NA non-coding downstream 173397 2403039 ~ 2427246 (+)
G351191 NA non-coding downstream 176724 2406366 ~ 2469539 (+)
G350848 NA other upstream 652572 1569266 ~ 1576119 (+)
CI01000140_01536330_01540225 NA other upstream 693117 1535269 ~ 1540380 (+)
G350901 NA other upstream 703519 1515978 ~ 1525172 (+)
G350832 NA other upstream 720983 1504386 ~ 1507708 (+)
G350762 NA other upstream 1187883 1039556 ~ 1040808 (+)

Expression


CI01000140_02228806_02229324 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

CI01000140_02228806_02229324 Expression in each Bioproject

Bar chart with 35 bars.
CI01000140_02228806_02229324 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network