XLOC_011578 (fut8a)


Basic Information

Item Value
gene id XLOC_011578
gene name fut8a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 33719415 ~ 33906488 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023051
AGTTCCTGTTTCCGCCACGACTCGCGAAGCATCCCTTTCATTAAAAACATACGCGCTGTGGAGATACCAGTTCGCTAGTGCCAAATCAAGGGGGAGGGAATCGTCCTCACATGTCCCAGCTAAGCCTTTGATAGGACGCACAGTCCGGAGCAGATCCCCTGTAGGAAGAGGAACTCATCAGAGTCGTCAGTTCTCTAAAACAAAGTCTCCAGGGATCTCAAACCTCTCCGCCCCTTCTATGCAAGGGGCAGCTGCCATGATATAACCTCCAAACCTcaaagagcacacacacacaagccagaCCCAGAGACCCCCTGACGTCCCCTGCTTCCTCTGTGGAAGAGTCCCGAGGTAAACATGTCTCAAATGCCTGTCTTGTGAAAGGGGAGGGCAGCAGTAGGCGCCATGCGTCCGTGGACGGGCTCGTGGCGCTGGATTATGCTGGTGCTGCTGGCCTGGGGAACGCTGCTATTCTACATCGGAGGTCACCTTGTGAAGGACAGCGAGCATCCGGAGCGATCCAGCAGAGAGCTGTCCAAGATCCTGGCCAAGCTGGAACGGCTCAAACAACAGAATGAAGATCTCAGACGCATGGCCGAGACGCTCAGGTTACCTGATGGTCAAGCCGATGGTGGTCCGGGAGCTGTGGGTAAATTACGTAACCTTGAAGAACAGCTGATAAGAGCTAAGGAGAAGATCAACTCTTATCGCAGTCTCCCTGCTGATGGCCCAGGAAAGGATCATGAAGAGTTAAGGAGGAAGGTGGAGAATGGTGTGAGGGAACTGTGGTATTTTGTGCGCAGCGAAGTGAAGAAACTGCCGCTGATGGAGACTGGAGCAATGCATAAACATGTCGACACACTCATGCAGGACCTGGGACATCAGCAGAGGTCAGTCATGACAGACCTTTATCATCTGAGCCAGGCGGATGGGGCTGGAGATTGGAGAGAGAAGGAAGCTAATGAACTCTCTGACCTCGTACAGAACAGAATTATGTATCTACAGAACCCTCAGGACTGCAGCAAGGCTCGTAAGCTGGTGTGTAACATCAATAAAGGTTGTGGTTACGGCTGCCAGCTGCATCATGTGGTCTACTGCTTCATGATTGCCTATGGCACGCAGCGGACGCTCATACTGGAGTCGCAGAACTGGCGCTATGCCACCGGAGGATGGGAGACCGTCTTTAAACCTGTCAGCGACACTTGCACTGACCGCACAGGGGCCTCCACTGGACACTGGTCTGGTGAAGCAAATGACCGGGACGTTCAGGTTATTGAGTTGCCCATCGTGGACAGTCTTCACCCTCGTCCACCTTACCTGCCCCTGGCCATCCCTGAAGATCTCGCAGACCGGCTTCAGAGGCTTCACGGAGACCCTGCTGTGTGGTGGGTTTCTCAGTTCGTCAAGTACCTGATCCGCCCTCAGGCATGGCTTATGAAGGAAATGCAGGAGGTCACCACCAAACTGGGCTTCAAGCATCCTATTATAGGGGTGCATGTGCGCCGGACAGATAAGGTAGGGACGGAGGCAGCTTTCCACCCCATAGAAGAGTACATGGTGCATGTGGAGGATCACTACCAGAGTCTGGCACAGCGTATGCATGTGGACAAGAAACGGGTTTACCTCGCCACTGATGACCCCTCACTACTGCAAGAGGCCAAGACCAAGTACCCTGATTATGAATTTATTAGTGATAATTCCATTTCCTGGTCGGCTGGACTACATAACCGCTACACTGAAAACTCTCTGAGAGGAGTCATCTTGGATATCCACTTCCTATCTAGGACCAACTACTTAGTGTGCACCTTTTCCTCACAGGTGTGTCGAGTTGCCTACGAGATCATGCAGACTCTCCACCCGGACGCCTCCTCGTACTTCTACTCCCTCGACGACATCTACTACTTCGGTGGACAAAACGCCCACAACCAAATCGCTATCTACCCGCATCAACCACGCAACAGCGACGACATCCCGCTGGAGCCTGGAGACGTGATCGGCGTCGCGGGCAATCATTGGGACGGATACTCTAAGGGAATCAACCGCAAAACGGGCCGCACCGGCCTCTACCCATCCTATAAGGTCAAAGAGAAGATCGAGACAGTGAAGTATCCCACATACCCAGAAGCGGACAAACTTCTCAAGAAACCCTAGAGTGagaataacaattaaaaacactCCTGAAACAAGGAAACCCTGGATCGCCCGGATGGGAATGCACTTTgcgtgtgtgagtgaatgtgtgtgtacatgtgtatgtgtgtgtgtgttgtctagGGGTTCTTCGAATGGGTTTTGGGACACCTTCCTAACTCTGGTGCTTGTACCTTGAGTCCCCCTGAAATGGCAATCAGGGTTGTGGAAGACAAAAAAAGGATGAACTCAAGACAACAAACGGAAGGCACTGTACTGTAGGTACTTTCTAATTAATCTCCGGGTAATGAAGGGAACTAAATACGTTTATTTAAGAACACAACTTGAAGAAGTGACTTTGCGACTCCAAACCGATCATGACAAAGGAATCATAAACCCGGGTTTACTCTTGTCCTCCTATGCTCTTATACCTCCTTGTGCACAATGATGGCGTCCTTTACTCTAGCCTCACTCCACTGGTTTCTCTCATGCCATCGCTTCGCCAACTGACACTCCTCGTCGCACCCATGAGCTATTAATTTCCACTGCCAttctgtgcttttaaatgtgacttctgctgtttttattttcatcGTGAAGTTTTATCATGTGTTtgtgcgcgcgcgtgcgtgtgtgtatgaaGTGTGCGGATTGGAAAACGGTGCCTATGAGGGCGATTTACTCACTTTTGCGGAAAGAGTTTTGACTCTGGAGCCTTACGGACCAGCCTTTCCATGCGGatttacaccccccccccccccccctcctttcCACATTGTGTCTTATCCACAGTCCATCATGTTTTTTAAGAGATCATTTcatgttattacattttaaaatatggaacCGATAAGAAAACAACACTTAATATGAAGATTATgatactaatattattaatgatgatgatgatgatgatgatgatgatgaagagaaAGAATAATTACGGTAACAATGACACTCGCTGTCATTATGAATTTTAGTTGATCATGAAGgagttgttcattgttttatgttcgcgGGCATTGTCTCTTTGGTAAGCAGATCAAATAAAATTGATCAGCCAAACTGGG
>TCONS_00023052
AGTGGGTGTCACTGGTCTGAGCCGGCCACATCAGCACCAATCATAGAAACAACTGATGCTTCTAGCTTTCAGAAcggcgtctctctctctctcacatacaataTTTCACCTCCAAAGTTTTACTGTTGACACTTCCACGCGCCTTTTCATGAATACCCTTGAGGAGAAGACAAATTACCCCTGTCTTAGGGCTCTTTCCTACTGACTCTAAAAAATGAGGAGAATATTTACTTGGTGTCAGTGACGTGAATATATTTTCTTATGTTACAGGGGGAGGGAATCGTCCTCACATGTCCCAGCTAAGCCTTTGATAGGACGCACAGTCCGGAGCAGATCCCCTGTAGGAAGAGGAACTCATCAGAGTCGTCAGTTCTCTAAAACAAAGTCTCCAGGGATCTCAAACCTCTCCGCCCCTTCTATGCAAGGGGCAGCTGCCATGATATAACCTCCAAACCTcaaagagcacacacacacaagccagaCCCAGAGACCCCCTGACGTCCCCTGCTTCCTCTGTGGAAGAGTCCCGAGGTAAACATGTCTCAAATGCCTGTCTTGTGAAAGGGGAGGGCAGCAGTAGGCGCCATGCGTCCGTGGACGGGCTCGTGGCGCTGGATTATGCTGGTGCTGCTGGCCTGGGGAACGCTGCTATTCTACATCGGAGGTCACCTTGTGAAGGACAGCGAGCATCCGGAGCGATCCAGCAGAGAGCTGTCCAAGATCCTGGCCAAGCTGGAACGGCTCAAACAACAGAATGAAGATCTCAGACGCATGGCCGAGACGCTCAGGTTACCTGATGGTCAAGCCGATGGTGGTCCGGGAGCTGTGGGTAAATTACGTAACCTTGAAGAACAGCTGATAAGAGCTAAGGAGAAGATCAACTCTTATCGCAGTCTCCCTGCTGATGGCCCAGGAAAGGATCATGAAGAGTTAAGGAGGAAGGTGGAGAATGGTGTGAGGGAACTGTGGTATTTTGTGCGCAGCGAAGTGAAGAAACTGCCGCTGATGGAGACTGGAGCAATGCATAAACATGTCGACACACTCATGCAGGACCTGGGACATCAGCAGAGGTCAGTCATGACAGACCTTTATCATCTGAGCCAGGCGGATGGGGCTGGAGATTGGAGAGAGAAGGAAGCTAATGAACTCTCTGACCTCGTACAGAACAGAATTATGTATCTACAGAACCCTCAGGACTGCAGCAAGGCTCGTAAGCTGGTGTGTAACATCAATAAAGGTTGTGGTTACGGCTGCCAGCTGCATCATGTGGTCTACTGCTTCATGATTGCCTATGGCACGCAGCGGACGCTCATACTGGAGTCGCAGAACTGGCGCTATGCCACCGGAGGATGGGAGACCGTCTTTAAACCTGTCAGCGACACTTGCACTGACCGCACAGGGGCCTCCACTGGACACTGGTCTGGTGAAGCAAATGACCGGGACGTTCAGGTTATTGAGTTGCCCATCGTGGACAGTCTTCACCCTCGTCCACCTTACCTGCCCCTGGCCATCCCTGAAGATCTCGCAGACCGGCTTCAGAGGCTTCACGGAGACCCTGCTGTGTGGTGGGTTTCTCAGTTCGTCAAGTACCTGATCCGCCCTCAGGCATGGCTTATGAAGGAAATGCAGGAGGTCACCACCAAACTGGGCTTCAAGCATCCTATTATAGGGGTGCATGTGCGCCGGACAGATAAGGTAGGGACGGAGGCAGCTTTCCACCCCATAGAAGAGTACATGGTGCATGTGGAGGATCACTACCAGAGTCTGGCACAGCGTATGCATGTGGACAAGAAACGGGTTTACCTCGCCACTGATGACCCCTCACTACTGCAAGAGGCCAAGACCAAGTACCCTGATTATGAATTTATTAGTGATAATTCCATTTCCTGGTCGGCTGGACTACATAACCGCTACACTGAAAACTCTCTGAGAGGAGTCATCTTGGATATCCACTTCCTATCTAGGACCAACTACTTAGTGTGCACCTTTTCCTCACAGGTGTGTCGAGTTGCCTACGAGATCATGCAGACTCTCCACCCGGACGCCTCCTCGTACTTCTACTCCCTCGACGACATCTACTACTTCGGTGGACAAAACGCCCACAACCAAATCGCTATCTACCCGCATCAACCACGCAACAGCGACGACATCCCGCTGGAGCCTGGAGACGTGATCGGCGTCGCGGGCAATCATTGGGACGGATACTCTAAGGGAATCAACCGCAAAACGGGCCGCACCGGCCTCTACCCATCCTATAAGGTCAAAGAGAAGATCGAGACAGTGAAGTATCCCACATACCCAGAAGCGGACAAACTTCTCAAGAAACCCTAG

Function

symbol description
fut8a Enables alpha-(1->6)-fucosyltransferase activity. Acts upstream of or within N-glycan fucosylation. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Orthologous to human FUT8 (fucosyltransferase 8).

GO:

id name namespace
GO:0036071 N-glycan fucosylation biological_process
GO:0006487 protein N-linked glycosylation biological_process
GO:0033578 protein glycosylation in Golgi biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008424 glycoprotein 6-alpha-L-fucosyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016757 transferase activity, transferring glycosyl groups molecular_function
GO:0046921 alpha-(1->6)-fucosyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-031118-20 Enables alpha-(1->6)-fucosyltransferase activity. Acts upstream of or within N-glycan fucosylation. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Orthologous to human FUT8 (fucosyltransferase 8).

Ensembl:

ensembl_id ENSDARG00000015449

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023051 False 3200 mRNA 0.49 11 33719415 33906488
TCONS_00023052 True 2331 mRNA 0.52 10 33767890 33905439

Neighbor

gene id symbol gene type direction distance location
XLOC_011577 BX957235.1 coding upstream 133953 33585346 ~ 33585462 (+)
XLOC_011576 pth2 coding upstream 220392 33495194 ~ 33499023 (+)
XLOC_011575 rin3 coding upstream 233385 33453689 ~ 33486030 (+)
XLOC_011574 snap23.2 coding upstream 278395 33433566 ~ 33441020 (+)
XLOC_011573 snap23.1 coding upstream 286318 33415319 ~ 33433097 (+)
XLOC_011579 gphna coding downstream 93142 33999630 ~ 34185513 (+)
XLOC_011580 mpp5a coding downstream 280144 34186632 ~ 34239514 (+)
XLOC_011581 eif2s1a coding downstream 337857 34244345 ~ 34254233 (+)
XLOC_011582 NA coding downstream 362632 34269120 ~ 34287056 (+)
XLOC_011583 NA coding downstream 727610 34634098 ~ 34675436 (+)
XLOC_011569 BX323819.1 non-coding upstream 420945 33298348 ~ 33298470 (+)
XLOC_011565 NA non-coding upstream 597619 33120580 ~ 33121796 (+)
XLOC_011564 NA non-coding upstream 598905 33118538 ~ 33120510 (+)
XLOC_011563 NA non-coding upstream 608249 33102503 ~ 33111166 (+)
XLOC_011587 CR556709.1 non-coding downstream 1372300 35278788 ~ 35288741 (+)
XLOC_011590 NA non-coding downstream 1649824 35556312 ~ 35557562 (+)
XLOC_011591 AL929378.1 non-coding downstream 2008522 35915010 ~ 35915126 (+)

Expression


Co-expression Network