XLOC_011585 (asap2a)


Basic Information

Item Value
gene id XLOC_011585
gene name asap2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 35097024 ~ 35223482 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023067
GAATTGCACTGCAAGAGCTGCATCGACCTGGAAGCCTGCAGCAAAATCCAGCACGACAACCTACACTCCTGTCCCAAAACAGAAGAGAAGCACATCACCGCACTGCTTTATTATCAAACGAGTGGACTAAATTCCTACTTAAACTGGAAGAAGTGAGATCCGTGAAAGAAAGagagggaaaaagagagagatttCCCCGTCGTACAAGCCGCACTTCAGTGTAGTTGGCTAATGATTTGTATTAATTCCCAACTTGTTTTAATCCACCGAGGACAAAACACCGCGATGATAAGACTCCAGGACGCTCATGAGAGTTTTAATTCGGCGTTTCATCTCTGAATTTCGACATTAAGTGCACCGCGACCGGCCAAATCAAGGATTAAACACGACATTTGTGGATTTCGCCAAAGGAGATACAATGCCTGACCAGATAACAGTGGCGGAGTTTGTCACGGAGACAAATGAAGATTATAAATCGCCCACCGCCTCAAACTTCACCACCAGAATGACTCACTGCAGGAACACAGTATCCGCACTGGAGGAGgccCTGGATGTGGACCGCAGTGTCCTTTACAAGATGAAGAAGTCAGTTAAGGCTATTTACGCCTCGGGTCTGGCTCATGTGGAGAATGAGGAGCAGTACACTCAAGCTCTGGAGAAGTTCGGAGAGAACTGTGTGTACAGAGATGACCCGGACCTGGGATCAGCCTTCCTGAAGTTCTCCGTCTTCACCAAGGAGCTCACGGCACTCTTCAAGAACCTGTTTCAGAACATGAATAATATCATTACCTTCCCATTGGACAGTCTGCTGAAGGGAGATCTGAAAGGGGTTAAAGGGGATCTCAAGAAGCCCTTCGATAAAGCCTGGAAAGACTACGAGACTAAAGTCTCTAAAATAGAGAAGGAGAAAAAAGAGCACGCCCGGCAGCACGGAATGATCCGGACGGAGATCAGCGGAGCAGAGATAGCAGAAGAGATGGAAAAAGAGCGGCGTTTCTTCCAGCTTCAGATGTGTGAGTACCTCCTCAAAGTCAATGAAATCAAGATCAAAAAAGGTGTCGACCTGCTCCAGAATCTCATCAAATACTTCCACGCACAGTGCAACTTCTTTCAGGATGGTCTCAAAGCGGTGGACAACCTCAAACCCTCAATAGAAAAACTGGCCACAGACTTGCACTCGATCAAACAGGTACAGGATGAAGAACGCAGACAGCTAACCCAGTTACGGGATGTGCTAAAAACTGCTCTGCAAGTGGAGCAGAAGGAGGACTCTCAGGTTAGACAGAGCGCCACCTACAGTCTGCACCAGCCGCAGGGCAACAAAGAGCATGGGACTGAGCGCAGCGGCAACCTTTACAAGAAGAGTGACGGGCTGCGGAAAGTGTGGCAGAAGAGAAAGTGCACAGTAAAGAATGGATATTTGACCATCTCACATGGGACGGCAAACAGACCTCCCGCCAAACTCAATCTTCTCACCTGTCAGGTGAAGCACAACCCAGAGGAGAAGAAAAGTTTTGACCTCATCTCACATGACAGAACATATCATTTCCAGGCAGAAGATGAGCCAGAGTGTCAAATatggatctcagtgctgcagaACAGTAAAGAAGAGGCGCTCAACAACGCCTTCAAGGGCGACCAGCATGTTGGTGAAAATAACATTGTGCAGGAGCTCACCAAGGCCATCCTGGGAGAGGTGAAGCGGATGGCGGGGAACGATGTCTGCTGCGACTGCGGTGCTCCCGGCCCCACATGGCTCTCCACCAACCTGGGCATCCTGACCTGCATCGAGTGTTCGGGGATCCACAGAGAGCTGGGCGTCCATTACTCCCGAATCCAGTCCCTCACACTCGACGTCCTCAGCACCTCCGAGCTCTTGCTGGCCAAGAACGTGGGGAATGCTGGCTTCAATGAGATCATGGAGGCCTGTCTGACGGCAGAAGATGTGATCAAACCGAATCCAGCCAGTGACATGCAGGCGAGGAAGGACTTTATCATGGCCAAATACACAGAGAAACGCTTCGCTCGTAAGAAGTGTCCAGACGCACTGTCGAAGCTGCACACGCTCTGTGATGCTGTGAAGGCCCGGGACATTTTCTCTCTCATCCAGGTCTATGCTGAAGGAGTGGATCTGATGGAGCCCATTCCTCTGGCTAATGGACATGAACAAGGTGAGACGGCTCTTCATCTGGCCGTGAGACTGGTGGACAGAACTTCCCTACACATCATCGACTTCCTCACCCAAAACAGTTTAAACCTGGATAAGCAAACGGCTAAAGGAAGCACAGCTCTGCATTACTGCTGCCTGACGGACAACAGCGAGTGTCTCAAACTGCTGCTCAGAGGAAAAGCCTCCATAGATATCGctAATGAAGCTGGAGAGACCCCGTTGGACATCGCCAGGCGACTCAAACATCTGCAGTGTGAGGAACTGctgaACCAGGCTCTTGCAGGGAAGTTCAATGCTCATGTGCATGTGGAGTATGAGTGGAGACTTCAGCATGAAGACCTGGACGAGAGTGATGAAGATCTGGATGAGAAGTCGAGTCCTCACCGGCGGGATGAGCGGCCCATCAGCTGCTACACACCGGGCAGTAACTCCCTTCAGCTGAGTCCAGCCAGCCTGAGCCGAGACGGTCGAGACCTGGTTAAAGACAAGCAACGCTTTGTGCCAAACCTGGTCAACAATGAAACCTACGGGACCATCATTAACACCAGCTCACCCGTCAGCCTGTCCTCTTCTGCTCCACCTCTACCACCCCGAAACCTAGTTCAGCCGTCTGCTCTTGCAGGACTGACTCAAGGATCTCCCGGCTGGAAGCCTGGCTCTCTGGATCTGAGCGGCAGACAGAGATCCTCCTCTGACCCTCCCAACATGCATCCTCCTGCGCCTCCCTTACGGGTCACTTCCACCTCCCTTCTAATGCCCAGCGGTGCTGCTCCTCCTCTGGCTAAAGCTACTGGTATGATGGAGACCATGAATATGCAACCCAAACCCGGACAGGGGCCTCCTGGACAGAACATCAACCGGGCTACAAGTGCGGACAAAAACTTCAGCAAAAGCACACTGATGCGCTCCGGATCCATCGAGAGACCAGGTAGATGTCAGAGAAACCATGTTAACTCTAAAGAAGTCCCAGGAGGCCCACAAAACACCACTGGTCAAACTCTGCCTGCGACCCACATGCCCAGGAAAACGTATTTGaagCCGAAGCGTGTGAAGGCCATGTATAACTGTGTGGCCGATAATCCAGACGAGCTGACCTTCTCTGAGGGAGAGCTTATCGTGGTGGATGGAGAGGAGGACCAGGAGTGGTGGctgGGCCACATTGAGGGAGAGCCAATGAGAAGAGGAGCGTTTCCTGTCACGTTTGTACAGTTCATTATGGACTGAAGCTCGAGAGATCACACACTGAACTGATGACGGCACTTCTCTGCCTCTGTGTGGCCTCACTAACCACCACTATCTTCATCATCATCGTTGTTCTTCCCTTTATGGTGAGGCCTGTATCTTCACCAATCTTCCACAAGTCCTGCCTCTGGAGAAATCAGCCTTCTGGGCAATAAACGCACTTTTGAACTTAATTTATCATGAACACAATGCTAATGAATGTCACCAAGATGAAGGTTTTGTTTCAGGATCATTCACATCCTTATTTCTTTAGACAGATCTGTGAATATAGTCTTATATGCCCACATTCCACATCTGGCAAGGAAAGACGGAAGCATAGTAGTGAAATGACAGCCTTTTTGGAGGACTCTGTTGGATAAGACGGCTCTGTTAATGGTGCTAAAGCAGGAATATGCTACAGGAGCTGTCTGTCCTAGGAGGAGCGCACTGATGTCCCCGTTTTCACACTACCTGCCCCAGTGCTGAGTGCAGAAATAGGTTTTCTCCAGCACTCGCACATGGGAAATCTCTGAAGTGCACTGTGTGATGGAGAAACTGACAGACTGAAGAGTGCTTTTGCGCTGGCTGAGGGACGTGAAGATTAAATGAAAGTAATCTTGACCCTGAAGCTGCTGGGATTTTGGAGCGTTGTGAATGTTCTCTGGCCTCCAGGGAAAGGAGAGGAAGAGCATCCAGGAGCTTTTTTTCTGTATAGGTATTTATAAATCGGAGCTGTTCTGTTTTAGACTCTCGTTGATTTTAACGATCTTCCGCAGAACTTGCTTCATTGTGCGAGCAATCTGCTGAATGATGTCATTTCTTTTTAAAGAGACAGACCAAACCTTCAAACTAATTAATTTACTCCAG

Function

symbol description
asap2a Predicted to enable GTPase activator activity. Predicted to act upstream of or within positive regulation of GTPase activity. Predicted to be located in cytoplasm. Orthologous to human ASAP2 (ArfGAP with SH3 domain, ankyrin repeat and PH domain 2).

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0005096 GTPase activator activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-256 Predicted to enable GTPase activator activity. Predicted to act upstream of or within positive regulation of GTPase activity. Predicted to be located in cytoplasm. Orthologous to human ASAP2 (ArfGAP with SH3 domain, ankyrin repeat and PH domain 2).

Ensembl:

ensembl_id ENSDARG00000010181

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023067 True 4258 mRNA 0.50 28 35097024 35223482

Neighbor

gene id symbol gene type direction distance location
XLOC_011584 id2a coding upstream 288859 34805897 ~ 34808165 (+)
XLOC_011583 NA coding upstream 421588 34634098 ~ 34675436 (+)
XLOC_011582 NA coding upstream 809968 34269120 ~ 34287056 (+)
XLOC_011581 eif2s1a coding upstream 842791 34244345 ~ 34254233 (+)
XLOC_011580 mpp5a coding upstream 857510 34186632 ~ 34239514 (+)
XLOC_011586 iah1 coding downstream 20271 35243753 ~ 35247374 (+)
XLOC_011587 CR556709.1 coding downstream 55306 35278788 ~ 35288741 (+)
XLOC_011588 cmpk2 coding downstream 139369 35362851 ~ 35375448 (+)
XLOC_011589 BX571665.1 coding downstream 208242 35431724 ~ 35437222 (+)
XLOC_011590 NA coding downstream 332830 35556312 ~ 35557562 (+)
XLOC_011577 BX957235.1 non-coding upstream 1511562 33585346 ~ 33585462 (+)
XLOC_011569 BX323819.1 non-coding upstream 1798554 33298348 ~ 33298470 (+)
XLOC_011565 NA non-coding upstream 1975228 33120580 ~ 33121796 (+)
XLOC_011591 AL929378.1 non-coding downstream 691528 35915010 ~ 35915126 (+)
XLOC_011593 CR354585.2 non-coding downstream 1390833 36614315 ~ 36614432 (+)
XLOC_011599 CR318625.1 non-coding downstream 2048537 37272019 ~ 37272133 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000062_02488009_02560794 ASAP2A, ASAP2, ASAP3 coding CI01000062 null 2487809 ~ 2562434 (-)