XLOC_011590


Basic Information

Item Value
gene id XLOC_011590
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 35556312 ~ 35557562 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024722
CTTCAGGTCTTTTGCATCACTTCCTGGTTTTGGGTCTCTGGTTGGTAGTGTTTGCAAGGTTGTTACATAGACTGCATGAGTGAAGCTGTATGAGTACGCTGTAAGCTGTGCACAGTGTTTCCTGCCTCATGTTTTAATGATCATACGTTGGTTAAAAGACTGCTGCTTCTGACTGTTATACCTGTGATCCTCCTTCTCCATTGCGAATAACGTTGcgttactattgcctttctatcaaaTTATATGGGTGCATCCTGCACCAGGCATCCGTTTTAATATTCGAGCCATTCCAGTAGCGATCAGGAGCTCTGCCATCACATCGAACAAACTGTCGTGGATATCGCCTCAAGTAGAGGGGGGCAGGTTGTGTTCAGTTTGGTTCAGTTTTTATGTTTCACTTTCGTTTTGCGTGAAATTTGAGTTCCtttcatttatgtttttggaTGTTGATTTCATGGTGTTGTTAGTATTGCTGCTATAAGTTTTAGCCACACcacacattttgttattttagtatttCATCTTGGTTGTATTGGTTTTGATTTTCCTCAGTTGTGATATTAGTTTAATGTTTTaagtttaatgttttattgtaaaactAGGAAGTCTGACGTGTTTATTTCTGTGAGCAACAGTAATTTTTATAATTGATTTGAGTATAGTGTTTGTATATTTGCACCTTTTGTGTTTTCCAGGAGCCTGGACCTCACGGGTGGAAGGGCCTTTtagtgaactgaactgaacttcttTGAGTGGTGTGATGCTGAGTGGGTGAAGTACACTGTGGTGTCTATAGAGTGCTGTGGATTTATTCTTTGGTGTTCACTTGTCCTGGTGAGAGCCCAGCTCCTGGGTTTAGTGTTTgtgtttatcattattatcattattattattatttgattactgTTGCTCCATATTGAGGAAATGTGCTTTTAATTGTGATTTTATGCAAGTGTAAACTCTATTGCTTAAGCAGAATAAATTTTGTTTCTCACTCATTTTAAAGGGAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024722 True 1010 lncRNA 0.38 4 35556312 35557562

Neighbor

gene id symbol gene type direction distance location
XLOC_011589 BX571665.1 coding upstream 119090 35431724 ~ 35437222 (+)
XLOC_011588 cmpk2 coding upstream 180864 35362851 ~ 35375448 (+)
XLOC_011587 CR556709.1 coding upstream 267571 35278788 ~ 35288741 (+)
XLOC_011586 iah1 coding upstream 308938 35243753 ~ 35247374 (+)
XLOC_011585 asap2a coding upstream 332830 35097024 ~ 35223482 (+)
XLOC_011591 AL929378.1 coding downstream 357448 35915010 ~ 35915126 (+)
XLOC_011592 htr1b coding downstream 1030719 36588281 ~ 36589605 (+)
XLOC_011593 CR354585.2 coding downstream 1056753 36614315 ~ 36614432 (+)
XLOC_011594 impg1b coding downstream 1069537 36627099 ~ 36681740 (+)
XLOC_011595 slc30a1b coding downstream 1658258 37215820 ~ 37221044 (+)
XLOC_011583 NA non-coding upstream 880876 34634098 ~ 34675436 (+)
XLOC_011582 NA non-coding upstream 1269256 34269120 ~ 34287056 (+)
XLOC_011577 BX957235.1 non-coding upstream 1970850 33585346 ~ 33585462 (+)
XLOC_011569 BX323819.1 non-coding upstream 2257842 33298348 ~ 33298470 (+)
XLOC_011599 CR318625.1 non-coding downstream 1714457 37272019 ~ 37272133 (+)
XLOC_011601 NA non-coding downstream 1822938 37380500 ~ 37398410 (+)
XLOC_011602 AL929543.1 non-coding downstream 1896114 37453676 ~ 37453807 (+)

Expression


Co-expression Network