XLOC_000116 (BX323038.1)



Basic Information


Item Value
gene id XLOC_000116
gene name BX323038.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 9277846 ~ 9285351 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00000214
CTTTAATTCCACTCTGGTTGCAGCATGTGGAGGGGGTGGCGATTCTACCGCCGGGTTTGGCGCAAGTAAACCCGGTTTGACAGTTTGGTCAGTGATAGTCTGGATTGGAGGTGCgaatttgattgattaattatgAACCCGTGAAGTTAATTGAAGTCGCTGTCATTCCCCTGCCTTGAAAAGCGAAGATGGAGgttgcagctggaatggcatccgctgtgtaaaacatttgctggattggcggttcattcatccTGACTATATCAGACTGTATCTGTCCACAAGcaagtattttttatattgtacagtttgttgaatatttaataatagtatTGAAATAAGGCAGTGGTAAACTTATTCTGATGTTTTGATCTTGCCTTGCAAACCTTTTTAAGTCACGTTTTTTTAAGGAGGAAAGAAAATTGAAGAACGctgtaatatacatatatataaatgatttaaCCCACTTAGTTATTTCTGTAAATCTTTAAAAAGTTAACTTTTGGCTCACCAATTCCGTTTGCA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092791

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00000214 True 525 lncRNA 0.38 3 9277846 9285351

Neighbor


gene id symbol gene type direction distance location
XLOC_000114 chtf18 coding upstream 50642 9199031 ~ 9227204 (+)
XLOC_000115 chtf18 coding upstream 56230 9218648 ~ 9221616 (+)
XLOC_000113 plk1 coding upstream 116003 9153141 ~ 9161843 (+)
XLOC_000112 rasd3 coding upstream 131950 9144958 ~ 9145896 (+)
XLOC_000111 NA coding upstream 145356 9129386 ~ 9132490 (+)
XLOC_000117 uncx4.1 coding downstream 4752 9290103 ~ 9294115 (+)
XLOC_000118 elfn1b coding downstream 271861 9557212 ~ 9712302 (+)
XLOC_000119 pmm2 coding downstream 575030 9860381 ~ 9866856 (+)
XLOC_000120 NA coding downstream 601604 9886955 ~ 9914630 (+)
XLOC_000121 NA coding downstream 661313 9946664 ~ 9951873 (+)
XLOC_000106 NA non-coding upstream 301424 8967479 ~ 8976422 (+)
XLOC_000105 NA non-coding upstream 311907 8950874 ~ 8965939 (+)
XLOC_000100 NA non-coding upstream 687210 8587230 ~ 8590636 (+)
XLOC_000098 AL928650.2 non-coding upstream 700572 8575307 ~ 8577274 (+)
XLOC_000133 AL935188.1 non-coding downstream 1078369 10363720 ~ 10363851 (+)
XLOC_000135 NA non-coding downstream 1176693 10462044 ~ 10462882 (+)
XLOC_000136 NA non-coding downstream 1332173 10617524 ~ 10617930 (+)

Expression



Co-expression Network