XLOC_011605



Basic Information


Item Value
gene id XLOC_011605
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 37665651 ~ 37668524 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024725
acaaaacgtacacggacccaTGCTATTGGCTAGTGCTCCTCTTCTGACTCAAAAGAAGTCATTGCTAATGTAACGGTAAAGAGGAAAAATACAGATTTGCTTCCTTTTATTTGGCGAAAAAACGATAACCTATTTTAAAACTAAAGTAACTCTTTTAAACTACTGAACCCAAAAACCTAACGCCAAATCATTATCTCAGATTTTAGtttatctttttgttgttgttgggatATGCGTCTTGAGTGAACATGAGAACATTTTTCATACGGACGCCTCAAATCTTTCAAGTCATAAAGCCATTATTTAATCTGTTATTTTTACACTGGATAAGTTAAACGCAGGTATCTAAAACTGTGATGCTGTCGATTGACCACTAGAGGACGTCGCGGTTCCACTGCGCAATCTGGATTTAGAGCCTTTACCAAGCTAAAGTGACAGCACATGTATGAGCTCACCTGAATGTAGTGGGCGTGGTCTGCACCTATAAAAACCAAACAATCAAACTCCGCCTCCATTTGGGATTCAGCCAATCATCTGTCAACACTCCAAATATGGACAGGTCCTCACCCTTTAAGAGCTTAATGAAGCAGCAAAGCGCCTCACAATCGGAGACTCCAGCTCAAACAGTTCCAGGACTAACAGCCCAGGGGGGGGTTCGGTTAAATGAAGTGTCTTGCATGGGAACGGAGTCTGTGGGGAGGGGTATCACTACAGTTTTCTTTAAGCATGTCAGTCATCAAAGCTGTCAGGGAGCAGTGGAGCAGACGATGGCTTCATGCTGCATTTGAGGGGTGTGCCGAAAGCAGCTCATGTTGAATAGATTCAAGTGCCAGGACTCAAATCCATTTATAAAGAAGGGTTGAGATGGAGAAAGAGTCCATATAAAACATACAATGGGAGGAAATCTGCTGTACAACTGGGCCCGTGTCATGTGGTGTGCTGCGGACAGATGCGCATCGGTAGTGACTGCAGAAAAACAGCCTTTGTTGGAGCCacttcttttccttatttaaaacattttatggaTAGCTAGCAGAACTGAAATGTGAAATTTTAGACCCTTTGGGATGGAAATGATTATTAAACATTTGCACTTTCTTTATTACAGTATATTGGCACATGGTGCACAGTGACAGAAGGTTATGGTCTGGCCGTAAGATTCATAATGCGTTTAGTGATCGAAGGGTCATTGAGCGTAAATTATCTCAATTATCAGATATTTTTCATCTCCATTAACATGcctctgaaatattttttaaaaatatttatgttttttatgagtaaaaaagaaagttaaaaacaaaatgtaaagttTACTATAAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024725 True 1324 lncRNA 0.40 3 37665651 37668524

Neighbor


gene id symbol gene type direction distance location
XLOC_011604 tmem229b coding upstream 15823 37624704 ~ 37649828 (+)
XLOC_011603 mta1 coding upstream 46760 37510808 ~ 37618891 (+)
XLOC_011602 AL929543.1 coding upstream 211844 37453676 ~ 37453807 (+)
XLOC_011601 NA coding upstream 267241 37380500 ~ 37398410 (+)
XLOC_011600 elmsan1b coding upstream 299983 37301860 ~ 37365668 (+)
XLOC_011606 NA coding downstream 231907 37900431 ~ 37922022 (+)
XLOC_011607 plekhh1 coding downstream 263909 37932433 ~ 38023273 (+)
XLOC_011608 slc25a21 coding downstream 361803 38030327 ~ 38233021 (+)
XLOC_011609 NA coding downstream 579524 38248048 ~ 38253066 (+)
XLOC_011610 nkx2.9 coding downstream 586581 38255105 ~ 38256390 (+)
XLOC_011599 CR318625.1 non-coding upstream 393518 37272019 ~ 37272133 (+)
XLOC_011593 CR354585.2 non-coding upstream 1051219 36614315 ~ 36614432 (+)
XLOC_011591 AL929378.1 non-coding upstream 1750525 35915010 ~ 35915126 (+)
XLOC_011617 NA non-coding downstream 996517 38665041 ~ 38665459 (+)
XLOC_011619 NA non-coding downstream 1110457 38778981 ~ 38782957 (+)
XLOC_011620 NA non-coding downstream 1114637 38783161 ~ 38784521 (+)

Expression



Co-expression Network