CI01000147_00491199_00512572 (DYNC2H1)


Basic Information

Item Value
gene id CI01000147_00491199_00512572
gene name DYNC2H1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 491199 ~ 513215 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000147_00491199_00512572.mRNA
ACAACCTTCTGCGTTCCGCGTAACAGAAGCTCGTTATTTTATCTTGCAGGAGTAAATTCACCTCATGTAAGAGATAGAGTGGTTAGCGTAGCCTAGCGTGCTAATCCTTCAGCAGAACTGATCAAACTGTCAGAGTCTGACTTCAGTAAGCCGTAAGACGCTCATTTCCCTTTATTTACTGTCCCCACGATATTCTTCAGGCTTTATATTTGTGAATTTGTTCATTATACAAGTAATAAGTGCGCATTTGCTTGTCGTGTTTGTGTGACAGCAGTACATGTATTAAACTGAATTAATCTTGACTCCAGATGTCACGTGTTTGTTAAACCTATGAAAAAAGTTACTCCAAATGCATACATTTTGCATAAAAAGTTTGCTTTAAATATTGATGCTTATTTTTAAAAAACCAATTGTGACATTTTGTGCTGTAAATAAAATCAAAGTAGGACTCAAGTATCACAGGAATTAATATTGACGGGTGTCTGTCAGTCATATATGCATTATTTTTTATGCTGTCATAAACAGCACTGCTTTATTACATAGATTGTAATTGGGAGAAAATATGATGGCTGACTGTATGATTTCTTCAATAACTGTTTTGTTTTTCTGTTGCTAATTCATATGATGTTTGAACAGGTGAAAGATGCCGCCTGGGACAGACGACCCTCGTAAACTCTTCATCCTGACCACGGCGGGAAACTACTTCTCTCTGGACACACCGGCGTCTCTCTCCTCCTGCCGTCCTCTCGATAACTTCCTAGATGATGGGAATGAGTTTCTGCTCGCCGTCACCAGACACGCAGATGAGCTGCACTTCTCCAACAAGCTGGAGAGTATGGAGGGTGACGGCAGGGTTCTTGTGTTCTTCAAACCTCATCCGTGTGTGGTGTCCGAGGACAACCTGCACCGATCCGTCCTGGTGTCCTCCATGCTGGAGTCTCCCATCAGCACTCTGTACCAGGCCCTGCGACAGGTCTACGGCCCCGTCCTGCTGCAGGATGATAAATGGAGTCAGTCGTTCGACTCAAAGCTTCAGTCTCTGCTCATGGATCTTGAGGTCGGGCTGGGCTCTGTGCTTAGACACTCAGCACCAAAGGATTCTGGGAAACGGAGTCATTCAGAGTCAGATGTGTTGAGTATCACGACCCCTCTGGATGAGTTCTGCTTCTGGGCCGATGTCAGTCGCTCTGGACAGCAGAACAGCGAGAGAGAGCGAGCCGCACACTTCTCTGAGCTCTTCACCACCATTGAGAAGGACTACAGTAATCTGGATAGTTTCAGTCTGGTGGAGGTACTGGACCTGATTGAGAGCACACGTGAGACAGTAGATGACGTGTGGAAACAGAATGAGCACGCCCCCTACCCCGAGACACGCATGATCAGACTCATGGATGTCATAGGCGGAGCTCTCGGCAGGTTCGTACAGAGGAAGTTGAATGCACTACGCTTATGGGAGGATCCTTATTTCACAGTCAGGGAGGGGCTTAAAGGGGGCGTGGCTGTCTGTGAGCAGTGGGTGGCGGCCTGTGAACACCTGACTGGTCAGGTGTGGAAACGCTACTCGCCTCATCCGTGGAGCGGAGAGAAGCACCGCCCACAGGGGCTGCAGAGCCTCGGCCAGCGATTGGAGGAGGTCGGACCGCACACCTATCAATCTTTGCAGTATAATCTGGTGCATTGTCTCATGACGTGTATGTTTCAGGTGGTGCAGGTGCGATCTGTGTGTGAGAAACTTCAGCGTTTGTTATCTGGAGGGAAACAACAGGTTTCAGCTGCACGTGTGTATCAGCCTTTCACGGGACTCAACCCGATACACTACAACCCTTACACTGAGCCCTTATGGAGAGCTGCAGTGTCTCAGTTTGATCGACTCATCACTCCAGCAGAACAGGAAGCAGCTGGAAAGCTCAAGACCTTCATAATAGATGCACAGGACAGTCCGCAGCAGCTGCTGCAGGCATTTCAGAAACACAGAGATCTGATCAAACGACCCACAATGAGCAAAGAACTGCAGCCTGAGAGAGAAACGCTCCTCACACGATTGCTGGACTACAACAAGGGACTGCGGGCAGATTTTGAGAGCCGTTGTCACGGCGCTCCAGGAGAGAAAACCGGTCCTCTAGCAGGAAGAAACCTTCCTGAGGTCGTCAACAATATCGTGTGGGTCAGACAGCTGCTGCTCAAGGTGGAGGACTCTCTGAAGATGGCAGACGCGTTGCTCTCTGATCTGTCTGGATTTCGGCCTCTGGTCCGTTTCTCTGATGAGCTGCAGGAGCAGCTGAGATCGTACGAGCAGGAGCAGTTTGAGGACTGGACCAGAGACCTGCTGTCAGGACTCTCCGATCCCAAATCTGGAATCAGTTTGCAGGCCAGCAATCGTGTCATGGAGTTGGATCACATGGATGGTAAACTGAAGATCCAGTACTCGGACCGGCTGGTGAGTTTACTCAGAGAGGTGCGGCAGCTCTCCGCTCTGGGCTTCACCATCCCTGCGAAGATCCAGCAGGCGGCAAACACCGCAGAGAAGTTCTACCGACAGGCCATCATCCTCAAACAGGTGGCGCATTTCTACAACACCATCGATCAGCAGATGATACCTTCTCAACGACCCATGATGCTCGGCTGTGCTCTGGCCTTTGAGCAGGTCATCAAGAACCCGCGGTCTCAGTCTCGCGAAGAAGGTGGAAAACTCCAGATCACGTGGGAGAATCCTAAAGAGCTGGAGCAGTACATCGGTAAACTGCAGAGTGCCGCAGAGAGACTCTCCACGGAGAACCGCAAACTCAGGAAGTGGCACACCGACTTCACTGACAAGGTGGTGTGTCTGATGGGAGTGGATCTCCTGCGTCAGCAGCAAAGATGGAAAGATGGTCTTCAGGATCTCAGGACTGGATTTGCCACACTGGAGTCTCAGGGTTTTCGTACAGGAGACATGAGGGCCTGGCGTCAGCACTGGAACCATCAGCTGTATAAAGCTCTGGAGCATCAGTATCAGGTGGGACTGGAGGCCCTCAACAAGAACCTGCCGGAGATTAACATTGACCTCATCTTCAAGCAGGGGCGGCTGCAGTTCCGTCCGGCGTTCGAAGAGGTCAGGGCAAAATACTACCGTGAGATGAAAAGGTTCATCTGCATCCCGAACCAGTTTAAAGGTGTGAGCGAGACGGGAGAGGAGCCCATATTCACCTGCATGATCGAACACAACTCCAGCGGCTTCCTGACCATCTTCAGCAAAGCTGAACTCCTCTTCAGTCGACTCACACAAGTGCTGGACAAGTTTAAGGACTGGGTGGTTCTGGGGCAGGTGGATATAGATGTTCTGGTGGAAAAACACCTCCACAGTGTCCAAGACTGGGAGAGAAACTTCAAAGCTCTCAAAGCCAAAGGAAAAGAGGCAGAGCGGCTGCCCAGCACAGAGAAGGTCGACTGCATCACGGTGAACTGTGAGCCTGTCAGAGTGGCCGTGGACGATCTCATCCAGAGGTTGTTTGACGCTCTGCTGACGTCCCTGAGGAGATCCATCCTGG

Function

symbol description
dync2h1 Acts upstream of or within cilium assembly and intraciliary transport. Located in non-motile cilium. Is expressed in central nervous system; pronephric duct; and retina. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy 3. Orthologous to human DYNC2H1 (dynein cytoplasmic 2 heavy chain 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000147_00491199_00512572.mRNA True 3527 mRNA 0.50 18 491199 513215

Neighbor

gene id symbol gene type direction distance location
CI01000147_00482393_00489991 DYNC2H1 coding downstream 1208 482393 ~ 489991 (-)
CI01000147_00426318_00471016 DYNC2H1 coding downstream 20183 426318 ~ 471016 (-)
CI01000147_00252331_00335060 GRIA4A, GRIA4 coding downstream 156139 248563 ~ 335060 (-)
CI01000147_00231088_00236774 AASDHPPT coding downstream 254425 231057 ~ 236774 (-)
CI01000147_00546348_00552951 NA coding upstream 30952 544167 ~ 552951 (-)
CI01000147_00586020_00603643 NA coding upstream 72633 585848 ~ 606212 (-)
CI01000147_00614373_00614621 NA coding upstream 100572 613787 ~ 617189 (-)
CI01000147_00631877_00639420 MB21D2 coding upstream 117369 630584 ~ 639420 (-)
CI01000147_00700597_00701633 NA coding upstream 186911 700126 ~ 702455 (-)
G356368 NA non-coding downstream 70821 419752 ~ 420378 (-)
G356364 NA non-coding downstream 71660 417635 ~ 419539 (-)
G356365 NA non-coding downstream 79259 399775 ~ 411940 (-)
G356348 NA non-coding downstream 147135 343220 ~ 344064 (-)
G356337 NA non-coding downstream 206850 263515 ~ 284349 (-)
G356384 NA non-coding upstream 69726 582941 ~ 584099 (-)
G356382 NA non-coding upstream 139472 652687 ~ 656083 (-)
G356423 NA non-coding upstream 156608 669823 ~ 670087 (-)
G356386 NA non-coding upstream 161982 675197 ~ 677479 (-)
G356274 NA other downstream 440300 48047 ~ 50953 (-)
G356249 NA other downstream 451357 14927 ~ 39842 (-)

Expression


Co-expression Network