CI01000147_00546348_00552951


Basic Information

Item Value
gene id CI01000147_00546348_00552951
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 544167 ~ 552951 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000147_00546348_00552951.mRNA
GAAACCGAGAGCTGAAAGGAGACGATCTGGTGATCTACAGGATGTATACCCCATACGCTGGCCTCTACACGTGTGTCGTTTCATATCAGATGAACGGACGCACACTCCAGTTCACACGCGCAATCAACATCACAGCTGTTGTTGCTAATGTCGGCAGTAAAGTTCCCGACATTCTGAATCCCGCAAGTGATCAGATCTACACAGTGACTCTGGGAGATAAAGCGACGCTGTCCTGTCGGGTGCATCTGCCTCACCTGTTCAAAGAAAAGCAGGAGATCTGGTGGACCATCGATAACAAAACTGTGGAGCAACTCGCCGACCCGCGATTCAGCTCACCTGAGGCCACGCTTCTGTCGGAATATTTCGGCGATGAGACGAAAGAACGACTCCTGCATGTGATGGATTTTTCAGCTGATGACCTGCAGAAGGAGTTCAACTGCTCCGCCAGAAACAGCCGCGGGTTCAACACCAGCAGAGCCATTCTCAAGAGCCAACGTGTGACTCTGGCGCTCATGTTGATGATGTTCGTCGTCTATCACGTGTTCTGGCTCGAGCTTCTGCTGCTCTATCGCTCCTGGTTCGGCTCGGATGAGAGATACACAGATGATAAGCAGTATGACGTGTACATCTCGTACGCACGCAACAGCGAGGAGGAGGAGTTTGTGCTGTCCACGCTGCGCAGGGTCCTGGAGACAGAGTTTGGTTACTCTGTCTGCATCTTCGACCGGGACAGTCTTCCTGGAGGAACTATAACAGATGATACGCTGAGGTTTGTGGGTCAGAGCCGGAGGCTGGCGGTTGTTGTGAGCCCGTGCAGCACTGTCCGTGGGACACAGGCGCTGCTCGAGCTGCAGGCCGGATTGACCAGCATGCTGCACGGCGGCAGCCTCAGGGTGGTTCTGATCCAGTTCAAACCGGTCCGGTGGAAGAGCTGGGTCAAAGAGCTCCGTCAGGCCCGTCTGGCGCTGACACTCATACGGTGGCAGGGCGAGAAATCGGCCCCTCTGTCCTCACGCTTCTGGAAACAACTGCAGCTCGAGCTGCCCATGAGGAGGACCACAGACAAACACATGCCGCTGCCAGACATCACACAACACACACACCACGCCGAAAACACACATCCTGGAAAGGAGAAACTAATCGATTGCTATTCTACAAGTGCGTTATAGACGTCCGTCGTGTCCGGAATCGCTCTCTATTCCCTATATAGTCAAATTTGTAAAGCGCTTTTTTTTTCCATTTTAAAGCAGCTTTACAGAAAGTCGAATAGTGGATGCCATATATTATTTATACATCACTTTATTGTGTCAAAACAAGAAAATAATGATTCGGTGACGCAAACAGAGTTCAATTCTGCTGTAAAGAAGCTCTAAAAGTAAGACAATAGTGTCATTGTTCAGTGTTGATTCAGTTCCGTTCAATAACTGTGTTCATAAAGTTTGTCAATTATGAAATGAGTTATAAAGCAGCTGTGGAGAAAACAGTGATGTCATCATTAGGTCAGTTCAGCTCTCTTTTGATTGTGTCACTGCAGTCAGATCAGTAATATTGCTGAATATTAAGTGTCTATACAGTGAGCAAATTCTGACGTTGATGTATATATTGTGTGCCGGAGAGGGTATTTAATAATTTAGTTAATTTTGTATTATTTTTATACTATTATAATATGTATTCATATTTTGAATTAGCTTTTATTTTTATATTTTCGGTTTTCTTTTTAATTTTAGTTTAAGTAATTTTGTTATGTGCTTTCGTCAATTTTATCTGTTATATAATATATATATATTAGGGCTGGGACAGTATATCGATGCATCGCGATCTGTGAATTTTCCAAATGCATCGCAAATCGATTCTGAGCTTAGTTTTTAACAGCAGATGGCGCTCTAGGCTAATTTTTAACCACATGCTTAAATGCTCACAAAGAAGAGCACTCGTGCGTTCGGCTGAGTCTGAGAATGTACTTGCACCTCAGAATGCTTTTATGATGCGAGATTAATGTAAACAGCCCTTGTAATTCACATTTCGAACTTTATGAATGAATAAGGTTCAAGTGGTGTGTGTAAGGAATTGAAAGGAAGCAAAGTATACTTTCTTTTATTTTTATTTCAGTTTTAGTTGTAGTAATTTTAGTACTTCAACTAAAACTTTTATTTCAGTTAAGTTTTTTATGCTTTTACTGGGGATTTCCATCATTTAGTATTATTTTTACACTATTATAGTATGTATTAATATTTTGAATTAGCTTTTATTTTTATATTTTCAGTTTTCATTGTAATTTTATTTTAAATAATTTTGTCATTTTTATCAGTTTTTTTATGTATGTTTCTGAATATCTTTGTTTTATTTTTATTTCAGTTACGTTTTTTTTATTATTATTATTTTATTGGGGATTTCCATCATTAATTTAGTATTATTTTATCCATTATTTAGTTTAAGTTTTGGTCATTTTTACTAGTTTATATTTTTACTGGGTTATATGACTTTCTTCTTTCAGACGAACACAATCGGGTTTACTGTGGGAGATATATATATATATATATATATATATATATATATTATTTACGTTTTAGTACTTCAGCTTATTTTATTTCCGTTATTTGCCGAGGCACTAAATTCTAAACTCCATTTCTAAATTCTGTTAAATATAAGGTTTTTTTATATTTAAGTTTTTCATGTAATATTTATATTCATATTTTCTTTTCTTTTTTCAGCTTTATTTCAGCTAACGAAAACTATTTTTAATAGTTTTACTGTAGTTAACAAACAGTAATTTTAAGCAAACTTAAAATATTTGTCAGTCAGACCTTAAATATTTCCTCTGAGATTTTAAGTAAATATTTCAATAATTTAATAATGCTTTAGTTCATAGTTCCATTAATGGTCACATGCCATGCAAGTAAACAAATACAATATTTCATCTTTTTTTTTTTTTTAATTTAAAAGTATTTATTTATTTTAATTATACATTATTATGGCTTAATTATTAGCTTTTCATCAACTCGTGAACCCCTGCGCTAGTGGTTTGGGATTGTTCACTTCTCATTGCGGTGCATTCTGGGATTGAATGAGTGCTTGTTTGATAATATGGTGTGTGACTACAGTAAGTGTGAGGTGTGTTACTGAGCCTCAGCCACAGGGGGGCACAATCAGGCTGGACAATTCAAGATAGTTCAGATGAATTTATGGTATGTCAGAGGTTTCCTTCCTTCTTTCATGTTCCATAACAAACTTCAAGCTGTTTTCATTCAGTTGTATTTGAGTCTTTGGTTGTTGTCATGCAGCATCTTATATGACCATGTCATGTCCTGTATGTTCTGTGATCACATTTTTAAGCTGTTTTGATAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000147_00546348_00552951.mRNA True 3350 mRNA 0.38 7 544167 552951

Neighbor

gene id symbol gene type direction distance location
CI01000147_00491199_00512572 DYNC2H1 coding downstream 30952 491199 ~ 513215 (-)
CI01000147_00482393_00489991 DYNC2H1 coding downstream 54176 482393 ~ 489991 (-)
CI01000147_00426318_00471016 DYNC2H1 coding downstream 73151 426318 ~ 471016 (-)
CI01000147_00252331_00335060 GRIA4A, GRIA4 coding downstream 209107 248563 ~ 335060 (-)
CI01000147_00231088_00236774 AASDHPPT coding downstream 307393 231057 ~ 236774 (-)
CI01000147_00586020_00603643 NA coding upstream 32897 585848 ~ 606212 (-)
CI01000147_00614373_00614621 NA coding upstream 60836 613787 ~ 617189 (-)
CI01000147_00631877_00639420 MB21D2 coding upstream 77633 630584 ~ 639420 (-)
CI01000147_00700597_00701633 NA coding upstream 147175 700126 ~ 702455 (-)
G356368 NA non-coding downstream 123789 419752 ~ 420378 (-)
G356364 NA non-coding downstream 124628 417635 ~ 419539 (-)
G356365 NA non-coding downstream 132227 399775 ~ 411940 (-)
G356348 NA non-coding downstream 200103 343220 ~ 344064 (-)
G356337 NA non-coding downstream 259818 263515 ~ 284349 (-)
G356384 NA non-coding upstream 29990 582941 ~ 584099 (-)
G356382 NA non-coding upstream 99736 652687 ~ 656083 (-)
G356423 NA non-coding upstream 116872 669823 ~ 670087 (-)
G356386 NA non-coding upstream 122246 675197 ~ 677479 (-)
G356274 NA other downstream 493268 48047 ~ 50953 (-)
G356249 NA other downstream 504325 14927 ~ 39842 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009541 CABZ01068246.1 coding NC_007126.7 CM002899.2 45338623 ~ 45356635 (-)