XLOC_011634


Basic Information

Item Value
gene id XLOC_011634
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 39967027 ~ 39971071 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024736
ttcgtctttaaagaAAACACAGCtaggcggtatgacgctgttcctttttgcgcttaccagctgacctttTACATTCCAtgtggatatcttttctgctgttacTCCAGTGGCTCGACGCATGTGTgggaggatttgagatgcagagcgaagttgaccgtgatgacagggtttaagtctggtgaagaacagttctaggcagagCCACCCCGCTGTGTGGAATCCGACCTTCTCACCCCTCGTGCATCCAGCATCCTCACTACTACTGGAGATCCCTCTCTGCCTAAGGTCCTCTTGGAACCCCCTCGGCTCAGGTCCAGAGGTAGAAGTCTTCTGTGGCCGCAAAACCACCCTGCGTTCATCTCCGACAAATGACAAACTGCAGCTGCCTTAGTTATTAATAAACTTTCTGTTTGAGCAACTTCTGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024736 True 426 lncRNA 0.50 2 39967027 39971071

Neighbor

gene id symbol gene type direction distance location
XLOC_011633 UBR1 coding upstream 98592 39834947 ~ 39868435 (+)
XLOC_011632 NA coding upstream 136789 39825535 ~ 39830238 (+)
XLOC_011631 ubr1 coding upstream 149484 39790388 ~ 39817543 (+)
XLOC_011630 dre-mir-2185-1 coding upstream 181115 39785815 ~ 39785912 (+)
XLOC_011629 NA coding upstream 182885 39766307 ~ 39784142 (+)
XLOC_011635 NA coding downstream 245366 40216437 ~ 40221377 (+)
XLOC_011636 NA coding downstream 447140 40418211 ~ 40424666 (+)
XLOC_011637 NA coding downstream 515235 40486306 ~ 40493856 (+)
XLOC_011638 slc4a1ap coding downstream 908260 40879331 ~ 40903365 (+)
XLOC_011639 NA coding downstream 1018902 40989973 ~ 40999861 (+)
XLOC_011626 BX469926.2 non-coding upstream 274331 39692582 ~ 39692696 (+)
XLOC_011625 NA non-coding upstream 338206 39628522 ~ 39628821 (+)
XLOC_011644 NA non-coding downstream 1504080 41475151 ~ 41478637 (+)

Expression


Co-expression Network