XLOC_011635


Basic Information

Item Value
gene id XLOC_011635
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 40216437 ~ 40221377 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024737
CGGAGCTTGTGGTCTCCCATTGGTCTGGGAGTAGGTGTTGCTCACAGTCACTAACTTTGCAACTTGCAAACCGCTGTTCACTTTGTAGCGAACCATAAGGATGACAATAAAAACCAACAAAGTGGCCACAATCACTCCACCAATCACTAAGATCATGGTTCCTCCTAGAAACTGACTGTGAAGTGACTGGCAGCGAGGAAACTCATCACGTGTCTCGAATTGCACACAGCCCACTATGTTGGTTGCAGTAAGTGTGGTGGCAGTGTCTTCCCAGATGGCTAACACACATAGATCATACTGCATCCCTGGCATCAGGTTGTTGACCAAAAAGGATCTGCTGATTGCCGGAATCATTCTATAAATAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024737 True 366 lncRNA 0.46 2 40216437 40221377

Neighbor

gene id symbol gene type direction distance location
XLOC_011634 NA coding upstream 245366 39967027 ~ 39971071 (+)
XLOC_011633 UBR1 coding upstream 348002 39834947 ~ 39868435 (+)
XLOC_011632 NA coding upstream 386199 39825535 ~ 39830238 (+)
XLOC_011631 ubr1 coding upstream 398894 39790388 ~ 39817543 (+)
XLOC_011630 dre-mir-2185-1 coding upstream 430525 39785815 ~ 39785912 (+)
XLOC_011636 NA coding downstream 196834 40418211 ~ 40424666 (+)
XLOC_011637 NA coding downstream 264929 40486306 ~ 40493856 (+)
XLOC_011638 slc4a1ap coding downstream 657954 40879331 ~ 40903365 (+)
XLOC_011639 NA coding downstream 768596 40989973 ~ 40999861 (+)
XLOC_011640 babam2 coding downstream 860135 41081512 ~ 41266561 (+)
XLOC_011629 NA non-coding upstream 432295 39766307 ~ 39784142 (+)
XLOC_011626 BX469926.2 non-coding upstream 523741 39692582 ~ 39692696 (+)
XLOC_011644 NA non-coding downstream 1253774 41475151 ~ 41478637 (+)
XLOC_011645 BX511195.1 non-coding downstream 1538431 41759808 ~ 41759925 (+)

Expression


Co-expression Network