G356301


Basic Information

Item Value
gene id G356301
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 130401 ~ 130940 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU406219
GATTGAGTGAAACTCTTGTCACAATGTGAGCACTTGTAAGGTTTTTCTCCAGTATGAATTCTTTGGTGCTGTTTCAGAAACCTAGCTGTTGTAAAGCTCTTTCCACAGTCAAAGCACATATGATCTCTTGCTTCATTATGTGTTTTCTGGTGCAGTTTAAAACCATCCATCCTTGAAAAACTCTTTCCACAGAAAGAACACACATAAGGCTTCTCACCTGAATGAACTTTCAGGTGTGTTTTTAGATTTGATGCCGAAATAAAATCTTTACCACACTGATCACAGTTAAATGGTTTTTCTCCAGAGTGAATGCGCAGATGAAATTTGAGGCCTGATTGATAAGCAAAGGTCTTCCCACACCGGGTGCATGTATACGGTTTCTCTCCAGAGTGAATTCTTATGTGTATCTTAAGGTTTCCTTTGCGACTGAAACTCTTTCCACACTGAGAGCAGGTGTACGGCTTATTGTCTTTTGTTCTTTGAATTTCGATGTTATGCTTTTCCTCCTCTGCTTCATTCAGTTCATGTTTTTGCAGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406219 True 540 lncRNA 0.39 1 130401 130940

Neighbor

gene id symbol gene type direction distance location
CI01000147_00231088_00236774 AASDHPPT coding upstream 100117 231057 ~ 236774 (-)
CI01000147_00252331_00335060 GRIA4A, GRIA4 coding upstream 121207 248563 ~ 335060 (-)
CI01000147_00426318_00471016 DYNC2H1 coding upstream 295378 426318 ~ 471016 (-)
CI01000147_00482393_00489991 DYNC2H1 coding upstream 351453 482393 ~ 489991 (-)
CI01000147_00491199_00512572 DYNC2H1 coding upstream 360259 491199 ~ 513215 (-)
G356297 NA non-coding downstream 4208 125875 ~ 126193 (-)
G356291 NA non-coding downstream 4726 125090 ~ 125675 (-)
G356261 NA non-coding downstream 21205 82147 ~ 109196 (-)
G356281 NA non-coding downstream 52683 77492 ~ 77718 (-)
G356276 NA non-coding downstream 66365 63810 ~ 64036 (-)
G356325 NA non-coding upstream 70253 201193 ~ 202348 (-)
G356294 NA non-coding upstream 82057 212997 ~ 217448 (-)
G356337 NA non-coding upstream 132575 263515 ~ 284349 (-)
G356348 NA non-coding upstream 212280 343220 ~ 344064 (-)
G356274 NA other downstream 79502 48047 ~ 50953 (-)
G356249 NA other downstream 90559 14927 ~ 39842 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1418359 LOC106591926 non-coding NC_048581.1 CM023235.2 9545525 ~ 9546046 (+)