G356364


Basic Information

Item Value
gene id G356364
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 417635 ~ 419539 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU406304
AAACATGACAGAGTTCGTTTATTTTGGTGCTTTTTATGACACAATACATGTGGAAAACTGGTCTGGCTAATTACAGACATCATATTCGACTCATATCTGACAATCAATGGTGCAAAACGGACTCTACTCCACAGACTGCTTTTGAGAGACGAGAGAGAATCATTGGTTTCATTTTGCGTGTCTTGAAGTTTAATAAAAGCGCTTTAAAAGCCTCGTAATTAAAGGCTAAATCCACACTGTCAACATCCGTCCCTGCGGCGCGGCGCTCCCGCTGAACCACAGCAGAATGAACGAGTCCCGCAGGGCCGCGCCGCCGGTAAATTAAAGCCCGATCAGGGAACAGAGGAACCCCGCAGATTTACAGGGAGATAAAGGAGAGTCCGGGACCGCCCGCTACTGAAGCGGATCATCGCACACGAGAGAAAAGACGGAGAACATCATGTCATCTGTCCACACAATAAATAGGCTATGCAAGACAATTATAATAGTTTGTGTGTAATGAAGTGCTTTAGTTGGCTGATGAAACATCAACAGACCACTGTCATATACACCTCATGTGTTTTCATGTCATGATATCTGACAAAGAACATGTCCAGGTGATATTTCACACCAAAAATAATAAATACAAATTTTGCTAGACGAAAATCCCATTTTTAGGATCATTAAGATAAATCTTAAATTGTTGCTGGAATGTAAAAAAGATTAAATTATAAAAATATTTATACATAATGGTAATATTGATGTACTTCCATCATGCTGAGTTAAATAATACAATTGCTAAATTTTTGTTACTGCTGCAGTAAAAATATTGAGTAATGAGAATTTGAGAATAAAAATGTCAAAAAATACAGTAATGTTTCTGTCTCAGTTGAGTAAATAAAATGATTCTCTAAATCATAATAATGACAAGAAAATTTCACATAATAATGACTATCATAAATATGAGCAACTTTCTAATGATATGTATTGAGAATCATTCTCGTAAAAATGATTTAACATATTGAGAAACTTTCTTGAAATTACTTTATTACATTAATTGCATTGATGATGTCATTATTCTGAGAAAACATCTAATGAGAAACTATCATCATTATTATCAGCTTCACATCATTATGAGACACAGAATCAAAGATTTTTCCCCCTAAATTTTACTACATAAAACTGAAACTTAATGACGAATTAATAAAATACCAAGCTATAACTTTGATAAAGTTTCTCATTAGCATGATATGGTTAGTAAGTCATTATTATGAGAAATTTTCTAAACAGACTTACAGAATCAGACCTAAAACAAGGCTTCTTTATTTATCTTTCTCTACATTTTAGGGTGAACTGGACATGTTTTTATGAGATTCACTTCAATAAGACCTTTGATCAGACAACAAAGAGAATATGAAAACTAAACCCACATGCGACAGCATGATCACAGTTATAAAAAGACAAAGACATTTCTTTTAATAAATAACACGGGATTAGATCAGATTGGAGGAGGAACCGCCCCCTCAGGGAGCTCTGACTTCTGATTGGTCTCAGAGAGCAAAAGCCTCATTAATATTCATTTACATTCCATTGGTGAGAACTTTACTGGACACAATAACACTTAACATCAAGAATAAAACAGAAACAGAGAAAGCTACATATCAAAGTCTCCCAACGCTGTGTGTGTCTTATGTTATCAAAAGGGTTTGTGTTTAGATGGAGGCATGACCTGAAGATATACGTCTGAATGGAGTGCAGTGACAGTGCGTGTGCGTGTGTGTGTTCATCGCGGCGGTCTGGACTGACACACACAGTCACATCTCTCATGATGCTGCAGGTAAATCTCCTCCAGAACCCAGTGAGCACGTGTTTTCTTCCTGTAGAAACTCGCACCCGGGGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406304 True 1883 lncRNA 0.36 2 417635 419539

Neighbor

gene id symbol gene type direction distance location
CI01000147_00252331_00335060 GRIA4A, GRIA4 coding downstream 82575 248563 ~ 335060 (-)
CI01000147_00231088_00236774 AASDHPPT coding downstream 180861 231057 ~ 236774 (-)
CI01000147_00426318_00471016 DYNC2H1 coding upstream 6779 426318 ~ 471016 (-)
CI01000147_00482393_00489991 DYNC2H1 coding upstream 62854 482393 ~ 489991 (-)
CI01000147_00491199_00512572 DYNC2H1 coding upstream 71660 491199 ~ 513215 (-)
CI01000147_00546348_00552951 NA coding upstream 124628 544167 ~ 552951 (-)
CI01000147_00586020_00603643 NA coding upstream 166309 585848 ~ 606212 (-)
G356365 NA non-coding downstream 5695 399775 ~ 411940 (-)
G356348 NA non-coding downstream 73571 343220 ~ 344064 (-)
G356337 NA non-coding downstream 133286 263515 ~ 284349 (-)
G356294 NA non-coding downstream 200187 212997 ~ 217448 (-)
G356368 NA non-coding upstream 213 419752 ~ 420378 (-)
G356384 NA non-coding upstream 163402 582941 ~ 584099 (-)
CI01000147_00614373_00614621 NA non-coding upstream 196681 613787 ~ 617189 (-)
G356382 NA non-coding upstream 233148 652687 ~ 656083 (-)
G356423 NA non-coding upstream 250284 669823 ~ 670087 (-)
G356274 NA other downstream 366736 48047 ~ 50953 (-)
G356249 NA other downstream 377793 14927 ~ 39842 (-)

Expression


Co-expression Network