G356382


Basic Information

Item Value
gene id G356382
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 652687 ~ 656083 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU406329
TATTGTTTTATGAAACTTTATTGTCATATCCAATTCAAAGTCTATCAAAAAGAAGTCAGAGTAAATTTCAGCTGCAGGGACAAAGTAAACTTTTTTTTAACATGATGTTTTTGCACCGAAAGCAATCAACGGGATCTGTACAATCCGCACACTAAAAGTTATACAATTTTTAATACAAAACAATTAAGTTCCCAACATAATCAGTTGAAAACTACGAAAGAAACCTCTGAGGATTGGCTGATAACTGCAAAACATTAAATAAAACACTGTTTGCACAATTTCAAAACTTCACAGAATTGTTTTATTCACATGAAACACACATCTAATAGCAATTTCCGAAACACCAGAACAGACCTTGTAACATTTATATAAAAAACTAAAATGATCCACATAAGTCTGACAACTTACATGACATAAACATGAAACATGAGATGAAAAACAAATGTACAGCAGGGAATTGATTTGATGATGTAAAGTGGGTGTTTCATATCAAAATAAAGTCTGACCTCAGCCAAAAATGAGAAAGATATTACATTTTGATGCAAGATTATGATGAAATCAACACTGATGAATCATGCACAATAAGAACAGCTATTTAAAACTGTAATAATATTTCAAAATGCCACTATTTTTACTGTATTTCTGATCAAATAAATGCATAAGATTATGCAAGTAAATGCATAAGACCCTAAACCTTTTGAACGGTAATGTATATCTGAACATTACTACGAGGGCAATTCTTTCAGGAACGTTAGGGAATTAAATAGTGCTGACTTCTAGGATGCAAGTACTAAAAAAGCATGTCCATGTACAAAAATAATCCCCTCAGACATAAGCTTTGGAGGTGCTGTTATCCGACGGAGCTGATCTGTAGATCTTCTGCGGCTGTGAAGCGGTGTAGTTATAGCTGTGACCCCTGAGAGAGAGAGAAGACAGGCGTGAGTGGTGTTTGTCTCAGATTTTGCGATTTGTGATCTGCGTGTACGTGTGGAGACTCACCGTGTTTGTGCAGGTGATGAACTCTTAAAGGACGAACAGAGGACTCCTCCACCCAATATGTCCAGAGCTCCTGCCGCCCAACCCAGATACAGACCGAGAGAGCATCGACTCAAACTGCTTGCAGTTGGTGACGCCAGTGCTTCCCTCCGCACACGTCTGCCACAGGTTCTGATAGTACCACACAGACGTGATTAGCTGGTCCACAAACGACGACGTACGCCACGAATCATTCAACAGCGACATGAAGGAGAGCAACCAGCCCCCCAAACACATCAAGAAGCCCAACAGCTGAATCGCAGTCGACATGATCAACGTCTCAAATCCACACGGATGACACACAATATCCAATGAAACTCTCTTCAACTACACCAGCGGACAGATTAAACTCCGATCCGAGCGCAGCCCCAGGATGGGAGTGTG
>TU406330
TATTGTTTTATGAAACTTTATTGTCATATCCAATTCAAAGTCTATCAAAAAGAAGTCAGAGTAAATTTCAGCTGCAGGGACAAAGTAAACTTTTTTTTAACATGATGTTTTTGCACCGAAAGCAATCAACGGGATCTGTACAATCCGCACACTAAAAGTTATACAATTTTTAATACAAAACAATTAAGTTCCCAACATAATCAGTTGAAAACTACGAAAGAAACCTCTGAGGATTGGCTGATAACTGCAAAACATTAAATAAAACACTGTTTGCACAATTTCAAAACTTCACAGAATTGTTTTATTCACATGAAACACACATCTAATAGCAATTTCCGAAACACCAGAACAGACCTTGTAACATTTATATAAAAAACTAAAATGATCCACATAAGTCTGACAACTTACATGACATAAACATGAAACATGAGATGAAAAACAAATGTACAGCAGGGAATTGATTTGATGATGTAAAGTGGGTGTTTCATATCAAAATAAAGTCTGACCTCAGCCAAAAATGAGAAAGATATTACATTTTGATGCAAGATTATGATGAAATCAACACTGATGAATCATGCACAATAAGAACAGCTATTTAAAACTGTAATAATATTTCAAAATGCCACTATTTTTACTGTATTTCTGATCAAATAAATGCATAAGATTATGCAAGTAAATGCATAAGACCCTAAACCTTTTGAACGGTAATGTATATCTGAACATTACTACGAGGGCAATTCTTTCAGGAACGTTAGGGAATTAAATAGTGCTGACTTCTAGGATGCAAGTACTAAAAAAGCATGTCCATGTACAAAAATAATCCCCTCAGACATAAGCTTTGGAGGTGCTGTTATCCGACGGAGCTGATCTGTAGATCTTCTGCGGCTGTGAAGCGGTGTAGTTATAGCTGTGACCCCTGAGAGAGAGAGAAGACAGGCGTGAGTGGTGTTTGTCTCAGATTTTGCGATTTGTGATCTGCGTGTACGTGTGGAGACTCACCGTGTTTGTGCAGGTGATGAACTCTTAAAGGACGAACAGAGGACTCCTCCACCCAATATGTCCAGAGCTCCTGCCGCCCAACCCAGATACAGACCGGCGCCCAGTTCATACTTTGTGCCTCCGTAAAAAGGATCATTAAATTCTTGAACGACTTGAGCGGCGTACCACGAAACTGCCACCATAACACACAAACCTGACAGGATGAATATCACTCCAGCTGTAAGGCTGATTTTGCCCTTCGTCTCCTCAGACGTGCTGCCCAGTTTAGTGCACTTGAGTCCCATCGTGCCCAGAATGACGGACAGCAAACCCAGAATGAGAGCGATTATCATCAGAGCACGACAGGCCTGGATGTATACAGATAGAGAGAGCATCGACTCAAACTGCTTGCAGTTGGTGACGCCAGTGCTTCCCTCCGCACACGTCTGCCACAGGTTCTGATAGTACCACACAGACGTGATTAGCTGGTCCACAAACGACGACGTACGCCACGAATCATTCAACAGCGACATGAAGGAGAGCAACCAGCCCCCCAAACACATCAAGAAGCCCAACAGCTGAATCGCAGTCGACATGATCAACGTCTCAAATCCACACGGATGACACACAATATCCAATGAAACTCTCTTCAACTACACCAGCGGACAGATTAAACTCCGATCCGAGCGCAGCCCCAGGATGGGAGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406329 False 1419 lncRNA 0.40 2 652687 656083
TU406330 True 1688 lncRNA 0.41 4 652687 656083

Neighbor

gene id symbol gene type direction distance location
CI01000147_00631877_00639420 MB21D2 coding downstream 13267 630584 ~ 639420 (-)
CI01000147_00614373_00614621 NA coding downstream 36259 613787 ~ 617189 (-)
CI01000147_00586020_00603643 NA coding downstream 46475 585848 ~ 606212 (-)
CI01000147_00546348_00552951 NA coding downstream 99736 544167 ~ 552951 (-)
CI01000147_00491199_00512572 DYNC2H1 coding downstream 139472 491199 ~ 513215 (-)
CI01000147_00700597_00701633 NA coding upstream 44043 700126 ~ 702455 (-)
G356384 NA non-coding downstream 68588 582941 ~ 584099 (-)
G356368 NA non-coding downstream 232309 419752 ~ 420378 (-)
G356364 NA non-coding downstream 233148 417635 ~ 419539 (-)
G356365 NA non-coding downstream 240747 399775 ~ 411940 (-)
G356348 NA non-coding downstream 308623 343220 ~ 344064 (-)
G356423 NA non-coding upstream 13740 669823 ~ 670087 (-)
G356386 NA non-coding upstream 19114 675197 ~ 677479 (-)
CI01000147_00252331_00335060 GRIA4A, GRIA4 other downstream 395817 248563 ~ 335060 (-)
G356274 NA other downstream 601788 48047 ~ 50953 (-)
G356249 NA other downstream 612845 14927 ~ 39842 (-)

Expression


Co-expression Network