XLOC_011647 (kiz)


Basic Information

Item Value
gene id XLOC_011647
gene name kiz
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 41992054 ~ 42045253 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023135
GGGATGTAAAAGGCGTCGTTTGTACCTTCTCTCTCTCCAGTTCCAGCTGTCTTTCTCTCCTCGCACCGCCCAGATAAGAAGAAATTCGCGCCCCTGAGTCAACTCGCCCCGCGTGGTCTCCTGGGTAACGGTGCTTATGGCAACCACTGTAAACAACGCGCTCCGCTGTACCGCGGCGAGCCGCGAACAGAACAGTTAACGTTATGGCTTTCTGCAATACCGAGTATTTCGACCAGATCGGAAATATTCAAAAGATCATACACGAACGTGAGAGGAGAAGACATGAGCTGGAAGAAACACTGTTTTCCTACTTAAGATCAGATGAAAGATTGACTAGGTTGAAGTGTGCCAAGATGCGCTGCTATGCCAAGGAGCTGCACGAGAGAGAGCAGCGAGCAAAGACGCGCAACCTTGAGCTTCTTGGGAATGTGGAGAACTTGGCATCAAAATTAAAAGAATTCTCCATTGATTGCAGCAGGCTGCTTCAAAAGAGGATGGAGTACAAGAATCATATTACCAGACTGAAGAAAGACAGGAGAAAAATGGGGAGCAGGGGCAAATCAGAAGCAGACGAGCACCCGAGCCGATTGAGTACTCAAGGATTATCACAGAGTGCTGCCATCTTCATGGGTCACCAGACCTCCAACGGCTCATCAAGAAATGATGGCGCCACAACCAAACGTTCGCCGTCTCATACAGAGCAGATTCCTAATCATCCTTCACTCCCTCCTTCACAAAGTGGCCTTTGTATGCACTCCCATGTTTCAAAAGCCAGCGGCGCTGGCATTTTATCTGATGACATTCTAAACTCAGGTGATTTCCTTGAGGGCAGGCGTTTGAGTGACGTGCGTGAAAAGCAGATGGAGTCTGATTGGGACATCTCTCAGAGGGCAAGAGAGCAGCAGAGACAGGAAGAACTAAAGTCACCTCACACAACCCTAAAGGAAGCTGAAGTGTCCTCTCGATCTGTGACCGTGAACAAGCCTGCAGACATTGTGTCGTTAGAGCACTGTCCAACTCGCAGTCCTTCCCCAGATACCACTGATCCAAGTGATGCCTCACAGTACATGAACTCAGGAGGTGAGGATAAGGAAGAGTCTGCAGAGGATGAAGATGACTCCGCGCCAATAAATCAGAATCATTCAGATTACACCAGCAACATTCTCAAACCAGACACCTCAATGCATTCAGACAGTGATGATTCAGCATCACAGAGTCAAAGTGGGCATCACGCATCGAGAGGAAATGCGTTAATTCAAGAGCAGAGTATAAAAGCCATGCAAACCCATTGTGGTAGCAAACACAAGAAGGTCAGCACATGGCAGTCTGGACAACATCACTTTTCTGAGTCCCCTAACAGGCTCTCCATGAAGGGATTTTGCCATCTTCTGAAGTGCATTGAGCAGCGTCTCGAAACTGAAGATGTAGTGAACCTCTACAGAATCTCAGTCAATGAGCAGAACCTCAGTGATGATATCATCAGCATATGTAGTCAACGTGGGCGTTTGGATGATATAGATCTGCATGCATGTGGTGCTGTGGTTCTGCAGCAGCTCTCCATGCTATCCTGCAGTCTGCCTCATGGATGCCTTTTACCCAGTGATCTCATCAACTCTCACTGGTCAACCACCTCAAAGCCACAGCAGATCAGattgtgtctGTCAGCTGAAAGTGCTGTGCTGTGGGACTGCTGTTTTACACACATGGTTCAGCTTCAGAAACAGAAACTCCTCAGCACTGACCACATCATCCAGCTCTTCACTCCACTCCTGCTGCCAGCCGACGCCACCTACACTGACAAGGCAGGAAAGCTGTTGAAGAGACTTCTGACCTACAAATCTGAGACCCATTATCCATCAAAAAGTGAATCGTCGTCATCTTCCAGTTTGCCTTCTCTTCTAAACGACAGTGTAGAGATCAAGCCCGCCAGGCCTTCCGGAACAAATGCTCAAACTGGCGAAGAACAAGAGACCAAAGCATATCAGCTGCTTAAACAATCTGTGGCACAAGAGAGGCACTGGAGTGACTCGGAGGAGGAGGTTTCAGAGCCACCAGATGCCCACAAACTGGAGAAGCCTGAGGTACAGCAGGATATTTTAACACAAAACAACCGGAAAAGTGTAAAGACGAAACCTTTCTCTGCTGTCCAATCAAAGGCATTTTGGGGAGAATCTGACGACAGCAATTCTGAGATCGAAATGGCCTTGCGTCCTCAGTCCTACAACACCAGCAGCCATGACTTTGACGATTTTTACGACTGA
>TCONS_00023136
ATAAGAAGAAATTCGCGCCCCTGAGTCAACTCGCCCCGCGTGGTCTCCTGGGTAACGGTGCTTATGGCAACCACTGTAAACAACGCGCTCCGCTGTACCGCGGCGAGCCGCGAACAGAACAGTTAACGTTATGGCTTTCTGCAATACCGAGTATTTCGACCAGATCGGAAATATTCAAAAGATCATACACGAACGTGAGAGGAGAAGACATGAGCTGGAAGAAACACTGTTTTCCTACTTAAGATCAGATGAAAGATTGACTAGGTTGAAGTGTGCCAAGATGCGCTGCTATGCCAAGGAGCTGCACGAGAGAGAGCAGCGAGCAAAGACGCGCAACCTTGAGCTTCTTGGGAATGTGGAGAACTTGGCATCAAAATTAAAAGAATTCTCCATTGATTGCAGCAGGCTGCTTCAAAAGAGGATGGAGTACAAGAATCATATTACCAGACTGAAGAAAGACAGGAGAAAAATGGGGAGCAGGGGCAAATCAGAAGCAGACGAGCACCCGAGCCGATTGAGTACTCAAGGATTATCACAGAGTGCTGCCATCTTCATGGGTCACCAGACCTCCAACGGCTCATCAAGAAATGATGGCGCCACAACCAAACGTTCGCCGTCTCATACAGAGCAGATTCCTAATCATCCTTCACTCCCTCCTTCACAAAGTGGCCTTTGTATGCACTCCCATGTTTCAAAAGCCAGCGGCGCTGGCATTTTATCTGATGACATTCTAAACTCAGGTGATTTCCTTGAGGGCAGGCGTTTGAGTGACGTGCGTGAAAAGCAGATGGAGTCTGATTGGGACATCTCTCAGAGGGCAAGAGAGCAGCAGAGACAGGAAGAACTAAAGTCACCTCACACAACCCTAAAGGAAGCTGAAGTGTCCTCTCGATCTGTGACCGTGAACAAGCCTGCAGACATTGTGTCGTTAGAGCACTGTCCAACTCGCAGTCCTTCCCCAGATACCACTGATCCAAGTGATGCCTCACAGTACATGAACTCAGGAGGTGAGGATAAGGAAGAGTCTGCAGAGGATGAAGATGACTCCGCGCCAATAAATCAGAATCATTCAGATTACACCAGCAACATTCTCAAACCAGACACCTCAATGCATTCAGACAGTGATGATTCAGCATCACAGAGTCAAAGTGGGCATCACGCATCGAGAGGAAATGCGTTAATTCAAGAGCAGAGTATAAAAGCCATGCAAACCCATTGTGGTAGCAAACACAAGAAGGTCAGCACATGGCAGTCTGGACAACATCACTTTTCTGAGTCCCCTAACAGGCTCTCCATGAAGGGATTTTGCCATCTTCTGAAGTGCATTGAGCAGCGTCTCGAAACTGAAGATGTAGTGAACCTCTACAGAATCTCAGTCAATGAGCAGAACCTCAGTGATGATATCATCAGCATATGTAGTCAACGTGGGCGTTTGGATGATATAGATCTGCATGCATGTGGTGCTGTGGTTCTGCAGCAGCTCTCCATGCTATCCTGCAGTCTGCCTCATGGATGCCTTTTACCCAGTGATCTCATCAACTCTCACTGGTCAACCACCTCAAAGCCACAGCAGATCAGattgtgtctGTCAGCTGAAAGTGCTGTGCTGTGGGACTGCTGTTTTACACACATGGTTCAGCTTCAGAAACAGAAACTCCTCAGCACTGACCACATCATCCAGCTCTTCACTCCACTCCTGCTGCCAGCCGACGCCACCTACACTGACAAGGCAGGAAAGCTGTTGAAGAGACTTCTGACCTACAAATCTGAGACCCATTATCCATCAAAAAGTGAATCGTCGTCATCTTCCAGTTTGCCTTCTCTTCTAAACGACAGTGTAGAGATCAAGCCCGCCAGGCCTTCCGGAACAAATGCTCAAACTGGCGAAGAACAAGAAATTCAAAGTGCTGAAGAGGACAGTGCCGACCAAAGCCCAGTGGAAAGTATTCCTATTAGAGAGACCAAAGCATATCAGCTGCTTAAACAATCTGTGGCACAAGAGAGGCACTGGAGTGACTCGGAGGAGGAGGTTTCAGAGCCACCAGATGCCCACAAACTGGAGAAGCCTGAGGTACAGCAGGATATTTTAACACAAAACAACCGGAAAAGTGTAAAGACGAAACCTTTCTCTGCTGTCCAATCAAAGGCATTTTGGGGAGAATCTGACGACAGCAATTCTGAGATCGAAATGGCCTTGCGTCCTCAGTCCTACAACACCAGCAGCCATGACTTTGACGATTTTTACGACTGATGCTTCTCTTTGCTTGAGTTCACAGCGTGGTGCATTTTTTTAATGAGCAGTTAATTTGTTTGAAAGAGATGCCTTTATGCAAGCgcaaaacaaacagaaatctTCACTCCGGAATGAGTGCGACATTCCATGAAAACAAAAAGAGCCATCCTCTTTATTGTGGCCAAAGACTGTGAAGGGTTTTCAAAACATGTTGGTGTTAACCCTGCTTGAATCTCTTTAGCTGAACAACACTTGGGCCTGGTTGAAATAGATTAAACTTGGTTTTTAAAG
>TCONS_00023137
AAACGACAGTGTAGAGATCAAGCCCGCCAGGCCTTCCGGAACAAATGCTCAAACTGGCGAAGAACAAGAGACCAAAGCATATCAGCTGCTTAAACAATCTGTGGCACAAGAGAGGCACTGGAGTGACTCGGAGGAGGAGGTTTCAGAGCCACCAGATGCCCACAAACTGGAGAAGCCTGAGGTACAGCAGGATATTTTAACACAAAACAACCGGAAAAGTGTAAAGACGAAACCTTTCTCTGCTGTCCAATCAAAGGCATTTTGGGGAGAATCTGACGACAGCAATTCTGAGATCGAAATGGCCTTGCGTCCTCAGTCCTACAACACCAGCAGCCATGACTTTGACGATTTTTACGACTGATGCTTCTCTTTGCTTGAGTTCACAGCGTGGTGCATTTTTTTAATGAGCAGTTAATTTGTTTGAAAGAGATGCCTTTATGCAAGCgcaaaacaaacagaaatctTCACTCCGGAATGAGTGCGACATTCCATGAAAACAAAAAGAGCCATCCTCTTTATTGTG

Function

symbol description
kiz Predicted to be involved in spindle organization. Predicted to be located in cell projection; cytoplasm; and cytoskeleton. Predicted to be active in centrosome. Human ortholog(s) of this gene implicated in retinitis pigmentosa 69. Orthologous to human KIZ (kizuna centrosomal protein).

GO:

id name namespace
GO:0007051 spindle organization biological_process
GO:0042995 cell projection cellular_component
GO:0005813 centrosome cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070615-4 Predicted to be involved in spindle organization. Predicted to be located in cell projection; cytoplasm; and cytoskeleton. Predicted to be active in centrosome. Human ortholog(s) of this gene implicated in retinitis pigmentosa 69. Orthologous to human KIZ (kizuna centrosomal protein).

Ensembl:

ensembl_id ENSDARG00000079753

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023135 False 2261 mRNA 0.48 14 41992054 42044980
TCONS_00023136 False 2524 mRNA 0.47 15 41992127 42045253
TCONS_00023137 True 523 mRNA 0.45 5 42027969 42045142

Neighbor

gene id symbol gene type direction distance location
XLOC_011646 NA coding upstream 228690 41762185 ~ 41763364 (+)
XLOC_011645 BX511195.1 coding upstream 232129 41759808 ~ 41759925 (+)
XLOC_011644 NA coding upstream 513417 41475151 ~ 41478637 (+)
XLOC_011643 insm1b coding upstream 525909 41463942 ~ 41466145 (+)
XLOC_011642 mocs1 coding upstream 623224 41337246 ~ 41368830 (+)
XLOC_011648 pax1a coding downstream 228987 42274240 ~ 42278340 (+)
XLOC_011649 NA coding downstream 237601 42282854 ~ 42286980 (+)
XLOC_011650 NA coding downstream 306232 42351485 ~ 42353357 (+)
XLOC_011651 NA coding downstream 415861 42461114 ~ 42461336 (+)
XLOC_011652 CR925755.1 coding downstream 424635 42469888 ~ 42502094 (+)
XLOC_011639 NA non-coding upstream 992193 40989973 ~ 40999861 (+)
XLOC_011637 NA non-coding upstream 1498198 40486306 ~ 40493856 (+)
XLOC_011656 NA non-coding downstream 1198617 43243870 ~ 43247075 (+)

Expression


Co-expression Network