XLOC_011660



Basic Information


Item Value
gene id XLOC_011660
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 43533795 ~ 43538510 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024745
cagaggaaacccacgccaacatggggaaaacatgcaaactccacacagaaatgccaactggcccggctgaggcaacagcactacccacggTGCCACCCTAAGAATCTTCTGGGCAATGCCATAGGGAACATGAGCCGCCACAGTCCCCAGCTCTGCAGCTCCCTCCACGTGGAACATCTGGTCATCAAAGAAGATGTGGGGCCTGATCTTTTCCAGCATGGGGCCTTTAGGGGCTCCTGCCAAGAAGAGGGCCTCGTCTGTCTCTAGACCCCAGGAACGTAACGTCTTGAGGGCCCGGGTGCCAGAACTGGCAGCGCTGCGAGCTGTTACCAAGTAAGTGCGGATGGGACAGTCCAAGCGCTGGCCTTTGGCGTAGAATTTCTGCTGCAGTTTCCCCAGAGCTTCCAGGAAACCCTTCAGTGGCCCCTATAGAGAAAGTGTTATAATAATTCAATACTGACAGAATTATAATATCATTGCTTTCTAGTGACAACATCCTAACT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024745 True 503 lncRNA 0.53 2 43533795 43538510

Neighbor


gene id symbol gene type direction distance location
XLOC_011659 NA coding upstream 13495 43519604 ~ 43520300 (+)
XLOC_011658 reep1 coding upstream 29692 43486436 ~ 43504103 (+)
XLOC_011657 chmp3 coding upstream 57515 43468732 ~ 43476280 (+)
XLOC_011656 NA coding upstream 286720 43243870 ~ 43247075 (+)
XLOC_011655 isca2 coding upstream 497504 43032529 ~ 43036291 (+)
XLOC_011661 NA coding downstream 5373 43543883 ~ 43544929 (+)
XLOC_011662 NA coding downstream 22894 43561404 ~ 43565736 (+)
XLOC_011663 cfap99 coding downstream 57182 43595692 ~ 43613566 (+)
XLOC_011664 znf365 coding downstream 85088 43623598 ~ 43638693 (+)
XLOC_011665 NA coding downstream 103307 43641817 ~ 43645960 (+)
XLOC_011652 CR925755.1 non-coding upstream 1031701 42469888 ~ 42502094 (+)
XLOC_011651 NA non-coding upstream 1072459 42461114 ~ 42461336 (+)
XLOC_011650 NA non-coding upstream 1180438 42351485 ~ 42353357 (+)
XLOC_011671 BX465227.2 non-coding downstream 403427 43941937 ~ 43942051 (+)
XLOC_011672 NA non-coding downstream 465611 44004121 ~ 44007838 (+)

Expression



Co-expression Network