XLOC_011663 (cfap99)


Basic Information

Item Value
gene id XLOC_011663
gene name cfap99
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 43595692 ~ 43613566 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023151
ATTTTTTCATCGCAGGACATTATCACACACATGAGCATATTTCTATGGTTCAGGACAGCATTTTAGGACATTTTTACTCtcaaaatgtttcattaaaatgcTTCGGCAATCCAAATGAGATGCGTTATAGGTGAAGATCTATCCATATTTGAGACTGCTGCCTATTGACCCAAAAGTATATTTAGTTTGGCTGAGAAATCCAGTGAGAATGAACTACAAAGAACTTGTCAACGAAGTCGCAAGGTTCCTGGACGAGTTTCAAGAAGACAAACAATGCATTGACAGTTTTACAGAGGATACTGCCAAGAATCTTCAGACTCGTTCCTCTGCTGACCAGAAGTTTATTATCAATACTCTGTATGGATGTATCATGCACAAGAAGCTTTTGAATGTTGTAGTCAACATCTTTTACCTTCATCATGGAAAAAATATCTTCAGGGTGGACCGGAATCTGTTTACTGttgtcTGTTATCTTGCCATGTTCTGTCTTGATGATCTTGGCCTGGAGCATTTCAGCAGAATTATCAAGTCTTTAGACAACGCAAAAATGCACAAATTCCTGAGTTTTTTCTTTAACGTCAACAACCTCACAACACATATCCAGAAGGAATGGAGTCACATCTATGATGCTGCAATCGTGGATGAAAACTGGATCACCCCATTGCTAAGTTGGTGCAGTGAGATGGAGATGCTGTTGGATCAGCTCACCATAAAAATGGGCATGGGGAGTGTGCCCAAAAGATCTCCCAGGAAAAACACTGAGCCTAAGGAATTTGATCTGACGAAGCCTAAAGCTCGACCGCTCCCTGCTCCTGAAGTCATTCCACAGCAGGACAAGCCCAAGCCGGTACCAGCAAGCACTCATAGATCTCCAAAGGAACCAGAGATTCTGGACGATTTGAGGCAGATGAACCGACTGAAAGCTTTTCAAACTCTGAATGAAGCAAACTCCCAGCAGTTCAGATGTGCAAACCCGCAAAAGTCTGAGAAAACTCAAAACATAATATCAGAGATTATTAAAAAGCGTGAAGCTGAACTCAAATTTGACAAGACTTATACTTCTGGGAGCCCTGCAACTCAAAAGACAAACAGCTTGCCTGTCAGACTGAACACAACTGCCATTCTGCGCGAGGGAGCTTTATATAATAGACAACTGGAAGGAGAGTTACAAAGATTAGAGCAACTATCACAGGGTGCAAGCGAACCATCTTCATTCCTGCAATGGCAGAAGGAGATGAAGGAGAAGGATCTGCAGGAGGAACTGGCAGAACTGGAGCGCCGAAGACTAGAAGGACGAATAAGCTACGAAGAGGCTGTTCTTGCTCGTGAGCGAGTTTTGAAGCATAACCGCTATAAAGCGCAGGAGACGAAAGAAGAGACTGCAGAGCTCATGCGCAAGTATGCAGAGAAACGACTGAAGGAGGAGAAGGAAATGAGGGAGCTGGTGCAACAAGTGGCTGATGGTCACAAGAGCTCCAAAGCTGCCAAAGCTAGGCTCCAAGAAATCAAACAACGAATAGTTAAGGAGGTCTCAGAGCAGAGCAGGGAACTACTCAGCCAGGCTTTGGAGGAGGCACAGGCCGAACTGAGCAGGAAGATGGAGCTCATACGTCAGATTCGTGCTTTTGAGTTAGTCCCTATGGTCAGACAAAAGTTTATTGATGAAACTGAGACCGCGGGTCATGATTTGCTTTGTGAGATGTCTCTGGCGGAGCTACGGGAGCGTTTGGCTCTCCTGAGAGAGTCAGAGCAGTGTGATCTGGAGGACAGAAGACAGCGCATCTTCCAGGAGAAACAGTTTAAAGAGCAACTACTGCTGGAACAGTTGGACAACATCGCTCTACGAAGAAATCTGGCAGAGCAGGCTGCTTTGCGCAGTCAACAAGAAAAAAAGATGAGAAGTGAACTGCGGGAGGCGGTCTTTAAAGATAAAAGAGTCCTAGCTCTACAGAAGACCTTGGAACAGAAACAGCAAGAAAGACaaaagagaaagactgaaaaaaaCACTGTGAAGAAAAATGAACAGGTGCTTCCTCTGACGTTGAAGACCTCCCTTAACAAAAAGCAGGTTCTTGAAGAACACCACTGGCAGGAGTTGGAGCGCAATTTGGAACAACAGATTCATGGGGCCTTCCAGCAGTCGGTCTACAAATAACTGCTGGTCAAAACCACAGGCGAGTTTTTCTTGATAGTGATAGCCATGAAAAGTCAGCCAATGTATACTTAAATTAAAACAGAGTAGAGCATCTTTTGTATTAGATAAATCTTTATGGCTCGACATCAATGTAttacagggatagttcacacaaacattttaattgtattatcattTACTTGACTTGTTCTAAattgttagattttttaaaattctgttgAAGAACATTAGAAAcctataatcattaatattcaaaGTAAGGAACATGGTGATTACTGGTTTCCAAAAGTACATTTGCTTTTCAACAGTTACTCAAAAGAGTTTGggacaagtaaaaggtgagtaaattaaaacGGAATTaaaattttggatgaactatcccttaaactgTAATTGAGcaaacaaaacactaaacaaacacatttgtaaatatatattctaaaatgtttttttcattatgtCAACATTGTTTTTGGTCTTAAAATTCAGCAGGTTGGCTGTATTATAAAGTCATacatgcacaaaaataaaaaatgcagaagAATAAACTAGTTTAGTACAACTTTTTAATGTTGTTCCATTTCATTTTAGGAAAAGAACTGCAAATATCTTTCCAGGTTACATTAATGCCCAAAGAAAAAAAGACCCAGATTAATGTTTGATAAAGAGAGGATTActctaacaataataaaaaataaaatgtaaagatattGCACCATAATGTGAATTAGACCATTAACATAATCAAGAATCCATAACATTGAGTGGAACTTATTGTGTGCACTACATTAACATTCAAAAGTGTACATaaaaggaaacaaacaaaaattacaatatttcCCCTAACAAGACATTTCCATGTACACTGTACCCTACATGCAATGCTTCATAGTGCTTGGAAACTAATTTGAGACTCTGCAACAAACTAATACTTAGTgtctaaaattaaaacaaaacattagatgttagtaaattatttaaaagtgtttaCCAGTATAAAATCATTATTCTATATgtagatattaaaaaaaacaagttttcatACCACAGGTACATTTTTCCTATtacattatgaaataaaaaaaagaaaaaatgaaatgctGTTACAGATGGTGGGTCAAAATCTTAAAGTGCTTAGCTGTAGTGGTTACAGAATGAGTGGTTCATACAGATATCAGTATTAAAGACATGATACACAGCTTACAGTCAGAGCTGAAATTTAGTCCCCATCCAGTCTTAAAAGTAAACTTAGCAATTATCCAATTACAGGACTTAACTGAAATGCATTAAGATTCTACAAAAGAAAGCAGCAGTCTGATTTAAGTTGTTTGCTCAAGCTTAGAGCAAACTCTGCAATTTATTCCCATTCATTCCCAGCCTCCCGCTGACCCTTGATATAGATCAATACAAGGACAAGAGGGAGTTTCTCTCCTTATGAGTCCAAGGATGTTTTATCTTTCCATATCAGAGCATTAATCAAAGAAATGTCTCCCGCCTCATTAATTTACCAGGCTTTGGGGTTCATCTTCTCTCGGAATGACATCCTCAGTTTGTTTCTGGGAGCTGGCACAGGAGGCTGAGGGTCCACGATGTATTCTTTCTTTGTATATTCAGGTAGATCAGACTCCTCAGCCCTTTTTTCAGGCTGTTGACCAGTCTCGATCTGTCCAAGAGGTGCGTTTTTGCGTGTGGATGTGTGGCTCTTCTGCAATTGCTGAATGATGGCAGAGAATTTAGCATCCAGCGAGGGTCGCCTGGCCCTTGGTTTGGGCCCTTTACAGTTCTCTTTCTCCTGATTGGTTGAAACGCTGGTGAAGGGTAATTTATCAGGAGGGGGTGGCGGAGCTCTTCTCTTCTTTTTGCTGCCCGTATCAGGGCTCGTAATAGACCGATTGCTTTCTTTACCTGGTGACAGAACCGTTTTTTGTACCACTATTGGCCGGGAGCCTTCAAACAGGGCTGCCCAATGAGGAGGCTCCGTCTCTTCCTCCTGGCCAATTAGAAATCGGCCATTAGTTTCCTCAATCTTATTGTGAATTATGTCTGTCAAGCTCTCAAATTTCCCAGGGGACCCAATGCCTGAAAAGAATCAATTTGGTTTTAAACTGGAGATATAGAGAAACACCACAAGATTCGTCCAAATTCATTCAAAATAAAGCAGTACAAACCGGGCTATGCAATATTTATTGGCTAtaacaataattacaattattgtaattgttttaaagtgAAAGTTTTACCCCATAATTTAAATTGCAATcttatcctccacttgttccaaaccagtttgagttataaagatatactgaagaatgctagAAATTGCTAGCCACTGAATTTTCATAACTTATTTTCTCTTAATGATGTCCATGGATAACAGTTTCCAACAttcgtcaaaatatcttcttttgtcttcaacagaaacactcaaaaggtttggaaccacccaAGAATGAGAAAATAgtgaatatacatttttattttggtgtgTACAAGTCACTTTAATAACGTGTAAGCTAACGTTATGAACAACGTCACTccgtttacaaaataaaaaataaaaaacgaaatATTGTCCAAATGTTAACTGCCTGTGAATACAGCCTTTTTAAAAgaagtttaaatgttaaataacaaacaatgtcaGTAAAGTTACTAAAGTACTCAAAGTTACTTTGCACAATAAAGGTTTGAGTTAatgatttaattttacatttaaaaatcactTCTTAATGAATCGTAATGAAAAGCAATCAGCTTTGAATTAATGGTTCAAGAACTCCCTCAGGGAATTGTTTGTCTTGATAACACAGGTGGCTTTTCGTTTTAAAAACAAAGTTGTTACAGTTATGCCTGGCGTCCAAACTACTTACTGAGTCTTAGTCccacaaatatttatttgaaatttatttatttgaaattgctGAAGAACCTATTCCAGATTGAAAACAGCACACTTGAGATGTTTTCAAaccatttatgcacattttggaatatcgTACAAAAAACCCTCCTAAATAGAAAggcaagatgtgcatacatttttaaacacaaagaaataaataaacttatgtgtacaactaagtaggataaacttttaatcCGATTACCAAAAGTGCATAAATGCATTTATCTAATAAATTcaaacatttgcatttaaacaatcatgtaataacaaaaataacagtgGCCAAGATAGCTTAACAAGTTGCAATTTAAGAA

Function

symbol description
cfap99 Orthologous to human CFAP99 (cilia and flagella associated protein 99).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-161107-1 Orthologous to human CFAP99 (cilia and flagella associated protein 99).

Ensembl:

ensembl_id ENSDARG00000097485

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023151 True 5377 mRNA 0.38 15 43595692 43613566

Neighbor

gene id symbol gene type direction distance location
XLOC_011662 NA coding upstream 29956 43561404 ~ 43565736 (+)
XLOC_011661 NA coding upstream 50763 43543883 ~ 43544929 (+)
XLOC_011660 NA coding upstream 57182 43533795 ~ 43538510 (+)
XLOC_011659 NA coding upstream 75392 43519604 ~ 43520300 (+)
XLOC_011658 reep1 coding upstream 91589 43486436 ~ 43504103 (+)
XLOC_011664 znf365 coding downstream 10032 43623598 ~ 43638693 (+)
XLOC_011665 NA coding downstream 28251 43641817 ~ 43645960 (+)
XLOC_011666 adob coding downstream 46374 43659940 ~ 43661745 (+)
XLOC_011667 FO704777.1 coding downstream 229970 43843536 ~ 43850100 (+)
XLOC_011668 zgc:66313 coding downstream 250142 43863708 ~ 43888569 (+)
XLOC_011656 NA non-coding upstream 348617 43243870 ~ 43247075 (+)
XLOC_011671 BX465227.2 non-coding downstream 328371 43941937 ~ 43942051 (+)
XLOC_011672 NA non-coding downstream 390555 44004121 ~ 44007838 (+)
XLOC_011675 NA non-coding downstream 635884 44249450 ~ 44255927 (+)
XLOC_011676 NA non-coding downstream 644485 44258051 ~ 44262819 (+)

Expression


Co-expression Network