XLOC_011666 (adob)


Basic Information

Item Value
gene id XLOC_011666
gene name adob
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 43659940 ~ 43661745 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023155
GGAGTGGTCATGGACAGAAATGACTTGATCCTAACGGTATTCCCGACAGTACGCTCAAGTTAAGCTTTTACACATGATTTTGATGGCCTAAAACGATACGGAAACGGACAGGGCTGCACTTGATTTCGCGCAAAGTTGAAAGTCAAGTCGACGCTGCTAGACACTTGCGTTATTATGATGCCACGAGACAACATGACTTCCACAGTCCAGAAAATCGCCAAACAGGCCCTCGCAACATTCCGAAACCCGTCTGTCATCGGCGAGCACAACAAAGTGTTTTTGGAGAACCAAAGCAAGCTGAAAAGCCTCTTGGCGGAGGTCAGAGCGGCGGACTTGAAGATCGCAGCCCGGACCCCCGAGAGCGCCCCGGTGCCGCATCAGCGCATCGCTCCTCCCGTCACATACATGCATATCTGCGAGACCGACTCCTTCAGCATGGGGGTGTTTCTGCTGAAAACGGGGGCTTCGATACCCCTGCACGACCATCCGGGGATGTACGGCATGCTGAAGGTGATCTACGGGAAGGTGCGGATCAGTTGTTTCGACCGCCTGGATAAACCGAGAGACGGCGCCAGCGGCGTGCAGTTCAACCCTCCGCTCATGCCCTTCCAGAGGGGCTCCTTACGGCCCTCAGTGCTGAAGTCCGTCGGGGAGTTCACAGAGGACAGCAGCCCGTGTGTGCTCTCACCCCAGCAGGACAATATCCACCAGATAGACGCTGTTGACGGACCCACCGCTTTCCTGGACATCTTAGCACCCCCGTACGACCCAGACGAAGGGAGAGACTGCCATTATTATAAAGTTTTGCAAGCTCATTCAGAGGCTGCAGATAAAAAGAGTGAAGTCCAGGATCAAGGGGACGTGTGGCTAATGGAAATACCCCAGCCTAGTGAATTTTGGTGTGGTGGTGAACCATACCCAGGGCCTAAAGTGACCCTCTGAGAGGGATGTATAACTGTATAAACTGGGATAATGATCACAGTCTGGAGTGATTcaggagttttttttcttttacctgGGTACCTTAatgagacagttcacccaaaagtgaaatcattttactcattctttacttgtttcaaagcttttttctgttcaacacaaaagaagatatatcaaagaaacctgtaaccatttatgtacatagtaggacaaacaaacacaattgaagtcgatggttacaggtttctaacattctttgaaaaatatttgtttgtaaaaGATTTGGAAACACttcagtgtgagtaaatggtgaactGTTTTCTTGGACAGAATATACAGTGGTTTATCTCTAGCCACTCATCACAGCTGCTGTCTTTAATTGTCTTTTGgcagtttatgttttttttttgtatttatgtccATAAATGTCCTGTGTTTGCATGCAGACTGTTCTGATTTTACATAGAGGTTCAACAAAAGTCTCTGTTCTCCATTTGCCTGGATTCTCTTTGTACAGCgtgtgattaatatttaattatttgcagCAGATGTGAGATTTGGTTTATCGGAGTGGGAATCTCGTCATCTTGTTTCCATTGTCATCATTGTGTTAATGCATTAAGCTGTGCAGGACCGAGAAATGCTTAGTAACAGGTTCAAAACACTCACTTGACAAGCTGGCCTACGTGACACTGgacacaaaaccttttttttgtcttttacacTCCTGATAATATTGATAATCAAGCACTTAGCCAGGATGCcaaatttaaaatagttaaaataatgaatgaaaatcaaTCATGCACTATGAAGAATGTGTTCCCtcctaaacatttaaattaataaaaaagggGAAAATTT

Function

symbol description
adob Predicted to enable metal ion binding activity and oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen. Is expressed in several structures, including liver; nervous system; pronephric duct; solid lens vesicle; and yolk syncytial layer. Orthologous to human ADO (2-aminoethanethiol dioxygenase).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0051213 dioxygenase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2267 Predicted to enable metal ion binding activity and oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen. Is expressed in several structures, including liver; nervous system; pronephric duct; solid lens vesicle; and yolk syncytial layer. Orthologous to human ADO (2-aminoethanethiol dioxygenase).

Ensembl:

ensembl_id ENSDARG00000053571

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023155 True 1806 mRNA 0.45 1 43659940 43661745

Neighbor

gene id symbol gene type direction distance location
XLOC_011665 NA coding upstream 13980 43641817 ~ 43645960 (+)
XLOC_011664 znf365 coding upstream 21247 43623598 ~ 43638693 (+)
XLOC_011663 cfap99 coding upstream 46374 43595692 ~ 43613566 (+)
XLOC_011662 NA coding upstream 94204 43561404 ~ 43565736 (+)
XLOC_011661 NA coding upstream 115011 43543883 ~ 43544929 (+)
XLOC_011667 FO704777.1 coding downstream 181791 43843536 ~ 43850100 (+)
XLOC_011668 zgc:66313 coding downstream 201963 43863708 ~ 43888569 (+)
XLOC_011669 msh4 coding downstream 227626 43889371 ~ 43920385 (+)
XLOC_011670 ktn1 coding downstream 264778 43926523 ~ 44002032 (+)
XLOC_011671 BX465227.2 coding downstream 280192 43941937 ~ 43942051 (+)
XLOC_011660 NA non-coding upstream 121430 43533795 ~ 43538510 (+)
XLOC_011659 NA non-coding upstream 139640 43519604 ~ 43520300 (+)
XLOC_011672 NA non-coding downstream 342376 44004121 ~ 44007838 (+)
XLOC_011675 NA non-coding downstream 587705 44249450 ~ 44255927 (+)
XLOC_011676 NA non-coding downstream 596306 44258051 ~ 44262819 (+)
XLOC_011677 BX548045.2 non-coding downstream 629660 44291405 ~ 44291520 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location