CI01000152_01567745_01570475 (PIH1D3)


Basic Information

Item Value
gene id CI01000152_01567745_01570475
gene name PIH1D3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 1567546 ~ 1570475 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_01567745_01570475.mRNA
GTAGCACTGTCTATGTGAAGAAGAACAGCAAAGGCATCTGGGATGAGGATGAAGTGACTGAGGGGGCGCATTTTGATGACCTCGCCGATCCACGGCCACAGCCAGAGTACGAGATTGTGCTGAAACAGTCTGTTGGGACTGAAGATTTGTTTCTTGGCTTGAGCAGAAAGGACCCCTCATCCATGTGTTGTGACAGCATGCTGGTAAGAGTTAAACTGCCAGATACAAAAGCATCTGATTTGGTGCTGGATGTGAGGGAGACGTTTCTTGACCTCAGAACTCCAAAGTATAAGTTGGGCCTTCACCTGCCTCACCCAGTGCACAAACATGAGGGGAATGCCAGATTCATCATGGAAAGAGAAGAACTGGAGATCACACTGCCCATGAACAGACCAATGGACTGCATCAACCTGACCTGAGAGAGACCCGAGAGAATGACTTGACCGTGAGAATAAA
>TU409712
AAGAAGAACAGCAAAGGCATCTGGGATGAGGATGAAGTGACTGAGGGGGCGCATTTTGATGACCTCGCCGATCCACGGCCACAGCCAGAGTACGAGATTGTGCTGAAACAGTCTGTTGGGACTGAAGATTTGTTTCTTGGCTTGAGCAGAAAGGACCCCTCATCCATGTGTTGTGACAGCATGCTGGTAAGAGTTAAACTGCCAGATACAAAAGCATCTGATTTGGTGCTGGATGTGAGGGAGACGTTTCTTGACCTCAGAACTCCAAAGTATAAGTTGGGCCTTCACCTGCCTCACCCAGTGCACAAACATGAGGGGAATGCCAGATTCATCATGGAAAGAGAAGAACTGGAGATCACACTGCCCATGAACAGACCAATGGACTGCATCAACCTGACCTGAGAGAGACCCGAGAGAATGACTTGACCGTGAGAATAAACACTTCAGAATATGCAGTGTTGACAACATCAAGTTCTACAGCCTTTCATTGACAGTCTTGGATCCAACCCGGAAACATGACCCATGAATTAATTCACTTACCAGGTTTATTAGCTCTAAAACCAGGAAATAAACATTTGGTTCAAATGTTTCCATATCAGCA

Function

symbol description
pih1d3 dynein assembly factor 6, axonemal

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_01567745_01570475.mRNA False 456 mRNA 0.49 4 1567708 1570475
TU409712 True 601 lncRNA 0.46 4 1567546 1570458

Neighbor

gene id symbol gene type direction distance location
CI01000152_01557532_01565618 NA coding downstream 2090 1557225 ~ 1565618 (-)
CI01000152_01545763_01547190 NA coding downstream 20518 1545334 ~ 1547190 (-)
CI01000152_01429044_01451054 LIG1 coding downstream 116654 1428865 ~ 1451054 (-)
CI01000152_01415414_01419131 MYP0, MPZ coding downstream 147645 1415310 ~ 1420063 (-)
CI01000152_01380778_01397434 ATP1A2A coding downstream 170274 1380140 ~ 1397434 (-)
CI01000152_01584481_01585153 NA coding upstream 13356 1583831 ~ 1585268 (-)
CI01000152_01755247_01760266 MAP6D1 coding upstream 184655 1755130 ~ 1760675 (-)
CI01000152_01763662_01769747 ACSM3 coding upstream 192814 1763289 ~ 1769747 (-)
CI01000152_01770267_01784486 NCAPD2 coding upstream 199616 1770091 ~ 1784486 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A coding upstream 321660 1890149 ~ 1893866 (-)
G359236 NA non-coding downstream 11378 1555957 ~ 1556330 (-)
G359202 NA non-coding downstream 32466 1472299 ~ 1535242 (-)
G359224 NA non-coding downstream 36935 1529727 ~ 1530773 (-)
G359200 NA non-coding downstream 95747 1471761 ~ 1471961 (-)
G359199 NA non-coding downstream 96137 1469245 ~ 1471571 (-)
G359226 NA non-coding upstream 1645 1572120 ~ 1575964 (-)
G359255 NA non-coding upstream 86081 1656556 ~ 1656929 (-)
G359277 NA non-coding upstream 91665 1662140 ~ 1663449 (-)
G359280 NA non-coding upstream 99318 1669793 ~ 1671034 (-)
G359281 NA non-coding upstream 101099 1671574 ~ 1672239 (-)
G359178 NA other downstream 223703 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1002424 560484 ~ 572648 (-)
CI01000152_02015257_02024292 CAPN10 other upstream 451064 2015257 ~ 2024292 (-)
G359788 NA other upstream 747793 2318268 ~ 2318734 (-)
G359800 NA other upstream 798517 2368992 ~ 2459836 (-)

Expression


Co-expression Network