CI01000152_01755247_01760266 (MAP6D1)


Basic Information

Item Value
gene id CI01000152_01755247_01760266
gene name MAP6D1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 1755130 ~ 1760675 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_01755247_01760266.mRNA
AGTACCCTACTTTTAGTTAGTGTAGACAGCATTTTTGGACATCAGTTGCGATCTGAGTGCTGCACGCGCCGATGGTGCCCAGAAAAGCCTTCTAGGTAAGAAGCGCACTATAGGTTTTGATTAAAAGAGGGTTTTAGAGCATTAAGTTGAGCTCTGTCAGGGGAAACAGCAGTGAGGTGCTCACGGGTCACCGACTCGGATCTTTATGGATTATTATTTTTTCTGCATCAACTGCAAATCACGTGAGATGAATGTGCAATGACAATGTCCCGACACCGAGCGGTCTCGCGCAGTTCTCGAGGAACGGGCACGCTCTCACATTCCTTCATGTAACCGAGCACTTCATCGCATTTTTTACTGTGTTTTCTTTCTTTTTATTTTGCTTTTTGTGTTGGTTTATTTAATAGCAATGGCTTGGCCGTGCATCAGCAGAGTCTGTTGCTTGGCTCGGTTCTGGAACCAGTTCGATAAATCGGATTTGTCGGTTCCGCTAACGATTCAGAACTACTCGGACATCGCGGAGCAGGAGGTGAGATCCGTCACCAAACTCGTTTCCACGGAACCGGCACCGAGCGTCGACTTCGTAACGCCGGAGCACGCTGCTGGAGTCCGGCGGCCGCACCGGGGACGGACCGAAACGAGTTATAAACCCCGCGAGGACTATCATCCCCCGGGTGTGCCTTTCCCGAGCGTCACCCAGTATAAACAGGATTACAAACCCTGGCCCATCCCGAAGAAGGATAACTTTCCCTGGATTAGTAACGGAGGGAAAGGCGGCACTTTAACGGACAGCCCGGTGAACGGTTACTCTAACGGCACGAGTCAACCGCGGGCGGACAGACAGGAGCGGAGCAGCAGGCAGAGAGGAGGAGATCAGATCAGCTCATACAGCTGTCAAAATAATGTTATAATGACCAAATACAACCAGAAACAACTGTTCAGACTTACGTGTGAAAGCTCCTCAGTGCTTCCTCTCTGTCTTTCTCTCTCTCTGTCTGATACATTTTTATCTTTCTCTGGAATCAGACAGGAGTACCAGCCTTGGTCTGGAGCCCGGCCGCAAAAGCCCGCCCACAAACGGCCCACGTTCCTGGGTACAGGTGCTGATGAGCCCCCGCCGGAGACCAGCTACCAGGCCGCCTTCAGCCCAGATGCACACAGACACACGGACATTGTTCCGGAGACCAGCACACACGGTCTGTCAGAGAAAGCACACACACACAGGACAGAGATCAGCATGAAACCAGAGGTAGATGAACTTACCGACGTCATTAGTTACCGTAACATTTTGACAAGTCAGAATGACTTTCTGTGGTAATCATCATCAGCATGCCAGAGTTTAAATTGTATTTAACCCAGAATTATATAAGCAGAGATATTGATTTGCGTAACCTTTTAGGTTCATCTGTGAAATCAAGCCTAATATGCAATTAAA

Function

symbol description
map6d1 Predicted to enable microtubule binding activity. Predicted to be involved in cytoskeleton-dependent intracellular transport and regulation of microtubule cytoskeleton organization. Predicted to act upstream of or within microtubule cytoskeleton organization. Predicted to be located in cytoplasm. Predicted to be active in Golgi-associated vesicle; cis-Golgi network; and microtubule. Orthologous to human MAP6D1 (MAP6 domain containing 1).

GO:

id name namespace
GO:0005874 microtubule cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_01755247_01760266.mRNA True 1435 mRNA 0.49 4 1755130 1760675

Neighbor

gene id symbol gene type direction distance location
CI01000152_01584481_01585153 NA coding downstream 169862 1583831 ~ 1585268 (-)
CI01000152_01567745_01570475 PIH1D3 coding downstream 184655 1567546 ~ 1570475 (-)
CI01000152_01557532_01565618 NA coding downstream 189512 1557225 ~ 1565618 (-)
CI01000152_01545763_01547190 NA coding downstream 207940 1545334 ~ 1547190 (-)
CI01000152_01429044_01451054 LIG1 coding downstream 304076 1428865 ~ 1451054 (-)
CI01000152_01763662_01769747 ACSM3 coding upstream 2614 1763289 ~ 1769747 (-)
CI01000152_01770267_01784486 NCAPD2 coding upstream 9416 1770091 ~ 1784486 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A coding upstream 131460 1890149 ~ 1893866 (-)
CI01000152_01905400_01907934 MUL1A coding upstream 143028 1903703 ~ 1907934 (-)
CI01000152_01917798_01946700 NA coding upstream 156028 1916703 ~ 1948064 (-)
G359289 NA non-coding downstream 65559 1689031 ~ 1689571 (-)
G359281 NA non-coding downstream 82891 1671574 ~ 1672239 (-)
G359280 NA non-coding downstream 84096 1669793 ~ 1671034 (-)
G359277 NA non-coding downstream 91681 1662140 ~ 1663449 (-)
G359255 NA non-coding downstream 98201 1656556 ~ 1656929 (-)
G359315 NA non-coding upstream 122302 1882977 ~ 1883380 (-)
G359318 NA non-coding upstream 122879 1883554 ~ 1883942 (-)
G359429 NA non-coding upstream 192337 1953012 ~ 1954853 (-)
G359372 NA non-coding upstream 285707 2046382 ~ 2059154 (-)
G359178 NA other downstream 411125 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1189846 560484 ~ 572648 (-)
CI01000152_02015257_02024292 CAPN10 other upstream 260864 2015257 ~ 2024292 (-)
G359788 NA other upstream 557593 2318268 ~ 2318734 (-)
G359800 NA other upstream 608317 2368992 ~ 2459836 (-)

Expression


Co-expression Network