CI01000152_02066678_02068178


Basic Information

Item Value
gene id CI01000152_02066678_02068178
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2066430 ~ 2068284 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_02066678_02068178.mRNA
ACCATCCTCAACATTGCTGCTACTCTCCGCACAACTAACTTATCAAATACTTTTGATCAATTTCATTTTTCTTTTTCACCTATAAGTGGCTCTTTTCCCTCTCAAGATGAACAGACTCGTCCTGACGTCATCGACGCTGCTGCTGTTGCTGTGTGTCTGGGTCACTTTGAGTCAAAGCGGTCCGGTGAGGTGCTGTACCAAGTATTCATCGCAGCCTTTTCCTGTTCACCGGCTGAAAGACTTCACACTGCAGGACTCCACCATGACCTGCAACATAGAGGCTGTCATTTTTACTACGATAAAGGACAGAATGATATGTGCTAACCCTGATGATCTATGGGTTCAGAATGCCATCACACATATCCAGGAAAGGAAAAAGTCAGCATAATGTGGACATCGTCAACTTGGTCTAAAACTGTCTTAAGCTGAACAAACCAACAGTAATATAAAGCACATGGATTAGAATTTATTTTTGTAATTAATAAATTAATATTTTGTTTTGACAGCAACAATGTGTCTTTTTGTTTTGTCTGCTATTGTTTCATCTTCAACATTTCTAAAAAGGTTGCGTTTGAAGTGTTTTCACAATACTTGATGCTCACAAGGCTGCTCTAGCATTACAACACTCTAAATAAA
>TU409944
TGCTACTCTCCGCACAACTAACTTATCAAATACTTTTGATCAATTTCATTTTTCTTTTTCACCTATAAGTGGCTCTTTTCCCTCTCAAGATGAACAGACTCGTCCTGACGTCATCGACGCTGCTGCTGTTGCTGTGTGTCTGGGTCACTTTGAGTCAAAGCGGTCCGGTGAGGTGCTGTACCAAGTATTCATCGCAGCCTTTTCCTGTTCACCGGCTGAAAGACTTCACACTGCAGGACTCCACCATGACCTGCAACATAGAGGCTGTCATTTTTACTACGATAAAGGACAGAATGATATGTGCTAACCCTGATGATCTATGGGTTCAGAATGCCATCACACATATCCAGGAAAGGAAAAAGTCAGCATAATGTGGACATCGTCAACTTGGTCTAAAACTGTCTTAAGCTGAACAAACCAACAGTAATATAAAGCACATGGATTAGAATTTATTTTTGTAATTAATAAATTAATATTTTGTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_02066678_02068178.mRNA False 636 mRNA 0.39 4 2066430 2068284
TU409944 True 486 lncRNA 0.40 4 2066563 2068267

Neighbor

gene id symbol gene type direction distance location
CI01000152_02015257_02024292 CAPN10 coding downstream 42138 2015257 ~ 2024292 (-)
CI01000152_02006897_02010593 EIF4E2 coding downstream 55837 2006352 ~ 2010593 (-)
CI01000152_01999033_01999195 NA coding downstream 67235 1998783 ~ 1999195 (-)
CI01000152_01917798_01946700 NA coding downstream 118366 1916703 ~ 1948064 (-)
CI01000152_01905400_01907934 MUL1A coding downstream 158496 1903703 ~ 1907934 (-)
CI01000152_02086974_02089993 NA coding upstream 18204 2086488 ~ 2090050 (-)
CI01000152_02190690_02206511 NA coding upstream 122398 2190682 ~ 2206658 (-)
CI01000152_02334753_02345817 GPSM2 coding upstream 265884 2334168 ~ 2345817 (-)
CI01000152_02427978_02434593 NA coding upstream 359235 2427519 ~ 2434593 (-)
CI01000152_02440117_02451100 NA coding upstream 371833 2440117 ~ 2451822 (-)
G359372 NA non-coding downstream 7276 2046382 ~ 2059154 (-)
G359429 NA non-coding downstream 111577 1953012 ~ 1954853 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A non-coding downstream 172971 1890149 ~ 1893866 (-)
G359318 NA non-coding downstream 182488 1883554 ~ 1883942 (-)
G359315 NA non-coding downstream 183050 1882977 ~ 1883380 (-)
G359709 NA non-coding upstream 92068 2160352 ~ 2175594 (-)
G359701 NA non-coding upstream 153644 2221928 ~ 2226863 (-)
G359737 NA non-coding upstream 182196 2250480 ~ 2252239 (-)
G359745 NA non-coding upstream 207559 2275843 ~ 2316256 (-)
G359178 NA other downstream 722425 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1501146 560484 ~ 572648 (-)
G359788 NA other upstream 249984 2318268 ~ 2318734 (-)
G359800 NA other upstream 300708 2368992 ~ 2459836 (-)

Expression


Co-expression Network