CI01000152_02190690_02206511


Basic Information

Item Value
gene id CI01000152_02190690_02206511
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2190682 ~ 2206658 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_02190690_02206511.mRNA
AGATTCATACTCACATTTTTCTGTGCATTCTGCTAATGGGCTCATTTACACACATTTTAGAAATAAACTGTCCATTCATATTTTTATTTAAATCATGTCTATGTCGTATCTAAATTAATGTTTTTATTATGGTTGAATTGTTGAAGAATGGCTTTCAAGAAAACTTTCAAGATACTTGGGCAAGCTGCATGCTTGGTAACACAAGGTGAAAGGGATGGACAGAGATTAGAGTGTTTTCATGCTCCACAAGAGGAAGAAGGACCTGCCTTGCTCTTCACGCTTGCAAAACTCAGTGACAGAATTGTGCCAAAACTTATGGCTACAGTGAGTCAACGGATAGAACTTCCTCTTCGAGTGGAGGAATGGACGAGAGAGCAAGTTTACTACTGGCTGACTGATGTGATACAAGTGAATAAAATACATGCAGATAAGCTGTACGATGAAGAAGTATCAGGGGAAGAACTAGTCTGTTACGAGCTCAAACATCTGTTGGATCTTGGTATTAAGCATGGTCCAGCTGTTAAGATTATCACCCGGTTAGAGAAGGTAAAAATGAAAGAACAAGGATCATATTCTTCTGACCATTCCCACACACAACACACAGAGGCCAGACCAGACACAACAGTGGAAAACAAAGACAGCATTTCAACAGATGAAACACAAATATCCAAAAATGCTAAAAAATCAAAGAAAAAATTACATGAAAAAGAAAAAACTGAAATTAGAAGGACTAATTCTATGGGAAAAGATTCAATGGATGGCATCTCTCAAAGAAGCACTCCAATAGAATACTCACAACCAAATGAACCTGTAAGGGTGTCCTCTTCACAAAACAAAACTACTCCACTTTCAGGAACTTCAAGTTGTACATCTTCCAAAGAAACTGAAGAGTCAGCTGACCCTAAAACATCATACATGAATGCTGATGAAGTAGCTGAAAAGGAAAAGCAGATGAGGAAGTCTGGATCCTTACAGCACTCATGTACTCTCTATCCATTTGATCAGAATTCTGCTTCTCATCGATACATTCAAAACTACACTTTACCGCCAGAGACAGGACCAGGCAATCTGATCGATCCAGTTCATGAGTACAAGTTTATGGGCAGAACAGATGATATGAATGTGATGAAGAAAAAATTCAATAAAGAGGTGTTCAGGTTTGCTGCTGGTTGTATGAATAGCCGCACAAATGGAACCATCCACTTTGGTGTAGCAGACTCCAAAGATTCTCAGTATGCTCATGCTGAGATCACTGGGGTCACTGTTGACAAGAAGGACACTATCATTGATCATTTTAATCAAGGTTATAAATCATACTTTGAAGAGCACACAGATGAAGCAAAGGCATGCATCAGGCAGCCACGCTTTGTAGAAGTGCTCTGCCCTGACGGCACACTATCTGGCAAATATGTCATAGAGGTGGATGTCGTTCCATCCCACAGCATAGTTCAGGGTAAGCTGTTTGATATCCAGACTCTGGATGAGGATAATCAATGGAAAAAGAGCAAAGGAAAATCACTTTTCATCAGAGATGGAGCTGCAACCCGAGATATCTATAAAATTGGTCATCCAAAAGACATACAAGTTGAACTGACTCGAATAAATTACCAAAAAAATGTTCTGGACGACAGGAGGAAGGAGGCAGAAAAGAAGCCTGAAAGCAAAAAAACATCAAACCAGGGGGAAAAGCTGAAGAATCTGCTGACATGTGGAAGTGGCAAACTGGATCATTATGATTACTTCATCATTGTAACAAACAAAAGCCACTCTGAACAACTCCAGCATCTTCAGTTCATGACAACATTGAAACTGTTCTGTGTGTTGGACTTTGATGCAAACTCTGTAGTAAATGGGTCCTGCCACAACTACAGAGATGTTCGAATTGCAAATCTTCACAAACCAAGCCAGTTCCATGGAGATCCAGGAACAATTGTGAAAAATCTCAACTTGTACAAACAAACAAGTTGGGTATTTTGTAATGGCAGAGAAGACCTGAACACAGAACCTGACAGACCACTCAGATCAAGCGAATGGTTAAAACATAAAGCAGGAGAAGTACAGGATATGATCTCGTTCATCTGCAACCCAGACACTCTTCCAAGAGGACGATTCTTAGTCATATTCCTCCTACTCTCCACTGTTGAGGGCATGAATGATCCAATTTTTGACACATTTATGTCATTTTATAAAAACCTTGTGGGTACAGAAAACACATTAAGTATATGCACTTCGGATGCTTCCTTTCAAAAATGGAGAGATTTCATTCAAACCAGATGTGAACATGACATCAGTCAGAGGAGTATATATGACTTAGAGCTCAGTGAAATCAATGGGACAATACTGAAACTGGGCCAGAACAAGCAAAATGCTCAGAGACTTCTTCCATCTGGTGAAGGAAGTTCAGTGATTCTCCAAAATAAAGATGAGGACCTAATGACATCCCTTGATATCCTGTGTGAAAACGAATGTGAAAACGAATTTGATGAGAGCTCTGCAGAATTTGAAGAGTTCAAAATTAAAACTGAATCAGAGTTCTATAGAGGAGGCAAAGTGAAATGGTGGAACTTTTATTTCTCAGAGCAACCTGCAGCAAAGCCATTCATAAAGCGCGACAAACATTCCAAACTAGAGAACAATATCAGATCTCAGACCAAAAATAACAAAGGTACTTGTGTCATGGTAAATCTTTTTCATCACCCAGGATGTGGCGGCACCACCATGGCCATGCATGTGATGTGGAATCTGCGAAAAGAATTCAGATGTGCAGTGTTGAAAGACAACATTGTTTCAAAGGAAGAAGTAGCCCAACATGTTGCTCATCTGATAAAGTGTGGAAAAAGTGAGCATTCATTAAAAACACCAGTCCTGCTATTAGTGGAAGACTCAGAGGAAACAGAAAACACACAAGTACTCAAGCACTCATTGAGGACAATCACAGGAGAAACAGGGGCAAGTGTCATCATCTTAAATTGCATACGTACAAAAACTCCAAAAGACAGACACAACAAAAGTGTTGATCAGAGTGAGTACATTACAGCAGAACTATCTGACAAGGAAAAATGTGCTTTTGAAATGAAGCTTAAGGAACTCCAAGAAATAAAGTCTTTCACAACTGAAAACTTCTACAGTTTTATGATCATGAAAACTAATTTCGACCCAGTGTATGTTGAAAATGTTGCAACTAACATACTAAAAGATTTTAGAGTTGAAAGCAAACAAGCACAGCTCTTCTGCATACTGGCTATGCTGAATTCATATGTGGCTGAACCAGCCATCTCAAGATCTTTATGTGAAGATTTTCTGGGCATCAAAAGTGCATTGTGGGGAAGAGAATCCGTGTTGGAGAAAATGGAGCCTTATTCCTGTTTGCTGATTGAATTTGGAGCAGAAGAATATGGGGGATTCAAAGCAATTCGCTTTGTTCATCAGCATCTTGCCACAGAATGTGTCAAACAACTAGAGGAGAACCATAACTGCTCCAGAGCTGACATTGTCCTTGACATGTTGCATTGCGATGCGTTTTTCAAAACTTTTGCAGTCAAAAATGTTCTTGTTCAATCAATGAAAAGCATGCTGATTACTCGTCAACGCAAGACAGGTGGTGATGAGAAAGACACTCTGTTTTCACCACTGATAGAAGACATAAACTCAGGTGAAGGTGGTCTTAATAAAATACAAGACATTTTTATTGCAGCTTCGGAAAGGTTTGATAAAGACTTCACAATTCCCCAGGCTCTAGCAAGACACTTGTACCTGAAAGAGAAGAACTTTGCTGAAGCTAAAAAGTGGGCAGACAGTGCAAAAGCCATCAAAGAAAATTCCTACACCGTAGATACAGTTGGACAAGTTGCAAAAAGTGAATTAAAACACAAACTTGAGTGTAAAAAACAAGAAAAGAAACCATGCACAGCTGAAGACTTGACTGAATATCTAGAATTAGCAAACACAGCAACCAAAGCTTTCAAACGGGCTCAAAGCCTGGCAAAGACAGATGATGCCCAAGAAAATGAACAGGAACTTTACAGAAAGTTAAGCCCATATAATATATCTGGCTACATGGGTGAAATTGACACAGCCATGACTGTTTTTGACATCATCAAAAAACTGCCATTGTTTGAGAATGGTGATCCAATGAAAGATCATTACATACAGAGCTTTCTCAAAGGAAAGGTGCCTTGCTCAAACATGCCTGTTTCTAAAAACAAATCCAATCTTGAATTTGTTGCTGTTCTTCAGGGCTATGAATCTTTCCTTACATCTTTAAAATCACAGGTGAAAGAGGCATTTGACTTCCTGGAAATTTACTTCACTTACTTGAAAGAAAAAGGATCTGACGGCATGAAAGAAGCAAAGATTCGCAAGAGGATCTCAGAACACTATCAACACTACATCTCATTATTTTGCAGCTCTGTAGAGGACAAACAACAAGAGCAAAAGCAGAAACCAACACTAAGTTTGAACATGGAAATTGAAGAGTGCCGAATGTTCCTGGAGGAAAAAAGGGCAGATACATTCCCAGGCCTTCTCCAATTTTTGGAGCACAATAAGGATACAGTACAAAAGATTGCTGAAAAATACTCATTCATATATAAGAATTCTCCCATCAAAAGCACCAAGGACAAAACAAATCACCTGCTTGCACATATAATACTTAAGTTGATTTGGCCAAAATCAAAGTTATCAAAATCCCATGAGGACCTCAATGATCTTTTAAAAGACATTCTGCAAGATGTTGGTACACAGCACCCATACCCAGAGCCTTTCTATCTTGCCATACTTTTGCTCTGGCCAGGCAGAAATGTCAGCAGCACTGGCATTAAGATGTACGTTGATAAAATCAGAAGCTCAGCAAGAAAGAATCTCTATCATATGTACAGAACAAGGTCAACCATTGCACACTTCTTCTTGGGAAAATCAGATGGAATGCAAAGGCTGGTGACAAAAGTTTCCCTTGACAGATCTGAGACCGTCAGTAGTGTGAAGAATCGCAACATTCTCTGGCAAACAGGAGAAATGTTTAAGGAAACCCCAATAAACAGCAAGCTCCTCAGAGTAAGTGGAACTATAGAGCAAGGTGAGGTCTTCACAGAGTATGGAAATCTCAAGATCCCATTGCGTCCTGCATTTCTGGGTGGAGTGAGAAGCGGCTACAGCACTGAGAAAGTGTCCTTCTACATTGGCTTTGCCATGGATGGACCACTTGCTTATGATATTCAGTACGAAGATGACAGATAGATAATATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_02190690_02206511.mRNA True 5243 mRNA 0.39 4 2190682 2206658

Neighbor

gene id symbol gene type direction distance location
CI01000152_02086974_02089993 NA coding downstream 100632 2086488 ~ 2090050 (-)
CI01000152_02066678_02068178 NA coding downstream 122398 2066430 ~ 2068284 (-)
CI01000152_02015257_02024292 CAPN10 coding downstream 166390 2015257 ~ 2024292 (-)
CI01000152_02006897_02010593 EIF4E2 coding downstream 180089 2006352 ~ 2010593 (-)
CI01000152_01999033_01999195 NA coding downstream 191487 1998783 ~ 1999195 (-)
CI01000152_02334753_02345817 GPSM2 coding upstream 127510 2334168 ~ 2345817 (-)
CI01000152_02427978_02434593 NA coding upstream 220861 2427519 ~ 2434593 (-)
CI01000152_02440117_02451100 NA coding upstream 233459 2440117 ~ 2451822 (-)
G359709 NA non-coding downstream 15088 2160352 ~ 2175594 (-)
G359372 NA non-coding downstream 131528 2046382 ~ 2059154 (-)
G359429 NA non-coding downstream 235829 1953012 ~ 1954853 (-)
G359701 NA non-coding upstream 15270 2221928 ~ 2226863 (-)
G359737 NA non-coding upstream 43822 2250480 ~ 2252239 (-)
G359745 NA non-coding upstream 69185 2275843 ~ 2316256 (-)
G359791 NA non-coding upstream 122337 2328995 ~ 2329399 (-)
G359819 NA non-coding upstream 411384 2618042 ~ 2620499 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A other downstream 297223 1890149 ~ 1893866 (-)
G359178 NA other downstream 846677 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1625398 560484 ~ 572648 (-)
G359788 NA other upstream 111610 2318268 ~ 2318734 (-)
G359800 NA other upstream 162334 2368992 ~ 2459836 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016807 SAMD9 coding NC_007113.7 CM002886.2 45332137 ~ 45336975 (-)