CI01000152_02427978_02434593



Basic Information


Item Value
gene id CI01000152_02427978_02434593
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2427519 ~ 2434593 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000152_02427978_02434593.mRNA
ATGGCGGTTAGTCAGCAGCAACAACAGCAGCAGGCCGTGAGCAAACCGGCCGGCGGGAAACACGGCAACGTTTTGCCGTTATGGGGCAACGAGAAGACTATGAACCTCAACCCGATGATCCTGACGAACGTCCTGTCATCGCCCTACTTCAAGGTCCAACTGTACGAGCTCAAGACGTACCACGAGGTGGTTGACGAGATCTACTTCAAGGTCAACCATGTGGAGCCATGGGAAAAAGGCAGCAGGAAGACTGCGGGGCAGACGGGAATGTGCGGAGGGGTTCGAGGAGTCGGGACGGGTGGAATCGTGTCCACTGCATTTTGCTTGCTGTATAAACTATTTACACTGAAACTGACCCGCAAACAAGTGATGGGTCTCATCACTCACACAGATTCGCCCTATATCAGGGCACTGGGCTTCATGTACATCAGGTATACTCAACCTCCTCCTGACTTGATTGACTGGTATGATGAGTTCCTTGACGACGAGGAGGAGTTGGACGTGAAGGCTGGAGGAGGGTGTGTAATGACTGTCGGAGAGATGCTCCGCTCCTTCCTGACCAAGCTGGAATGGTTCTCAACATTGTTCCCACGAATACCTGTTCCTGTGCAGAAGGCAATCGACCAGCACATGAAGAGCCGACCACGTAAACCTCCGCAAAGAGATGAGCAGGAGGAGGAGGAGGAGGCGGCAACGGCAACTGATTCAACAAGGCATGGAGATAGGCGCCGTTCCAGGACACCTAAGAGAAGTCCGAGTCCTAGGAGATCCCAAAATCGTTCCCGGAGTCGCAGCCATCACAAAGAAAAACATGGTGCAAGCTTCGACCGTGAACTGGAGAGAGAACGAGATCGCAGCAGGAGCAGGCAGGAAGCAGGGGAGGAGAAGAACAGGAAGCGGGAACGCAGCCATAGTAAGGAGCGGTCACACAAGCGCAGTCGCAGCAAAGATCGCCTGCACCGTCGAGAATCCAGCAATGGACGAGAACATGTAAAACAAGAACGCCACAGTCCCGAACCAGGTGAAAGAACAAACAGTGTTCGAGCGGAGTCTCCCTGATCCAAGTCTGTCTCCATCTCCTCTCTCTCAGATTCCCTCTGCACCTTTATTCCAGTCCCTCTCTTATTACTTCATGTCCTTATATATAATCCTCTTGTGTGCCACTTGTGTTGAAGTAAACAAATGGAAAAGCCTGGATTTTTTTTATATCTTTTTTTTTTTTTTTTTTTCTGCACTGTTGTCCACCACCTGTGTAGATATTAAAAATGCCATTTCCTCTCAGTTGCCCATTACTGATGTCTGGACTGAAAATGGCGTTTTAAAATCCTTTTTTAAATCCATTTTCTCCCCCAATTTGTTTTCAGGTTTCTCACAAATGGCTTTGTACATAGAGCTCAGAGAATGTTTTAAATTTCAACAGAGTGACCACAGAGTTGAATTTGTGCACAGGCTGCTGAAAGCTGTGCTGACATTATGCTGTTTAATTCATTGCTCTGTTGCATCTCGTTTTCTAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000152_02427978_02434593.mRNA True 1518 mRNA 0.49 7 2427519 2434593
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000152_02334753_02345817 GPSM2 coding downstream 81702 2334168 ~ 2345817 (-)
CI01000152_02190690_02206511 NA coding downstream 220861 2190682 ~ 2206658 (-)
CI01000152_02086974_02089993 NA coding downstream 337469 2086488 ~ 2090050 (-)
CI01000152_02066678_02068178 NA coding downstream 359235 2066430 ~ 2068284 (-)
CI01000152_02015257_02024292 CAPN10 coding downstream 403227 2015257 ~ 2024292 (-)
CI01000152_02440117_02451100 NA coding upstream 5524 2440117 ~ 2451822 (-)
G359791 NA non-coding downstream 98120 2328995 ~ 2329399 (-)
G359745 NA non-coding downstream 111263 2275843 ~ 2316256 (-)
G359737 NA non-coding downstream 175280 2250480 ~ 2252239 (-)
G359701 NA non-coding downstream 200656 2221928 ~ 2226863 (-)
G359709 NA non-coding downstream 251925 2160352 ~ 2175594 (-)
G359819 NA non-coding upstream 183449 2618042 ~ 2620499 (-)
G359911 NA non-coding upstream 203121 2637714 ~ 2643327 (-)
G359884 NA non-coding upstream 216099 2650692 ~ 2655413 (-)
G359925 NA non-coding upstream 252169 2686762 ~ 2688694 (-)
G359971 NA non-coding upstream 353792 2788385 ~ 2792610 (-)
G359788 NA other downstream 108785 2318268 ~ 2318734 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A other downstream 534060 1890149 ~ 1893866 (-)
G359178 NA other downstream 1083514 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1862235 560484 ~ 572648 (-)

Expression


CI01000152_02427978_02434593 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 125.
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CI01000152_02427978_02434593 Expression in each Bioproject

Bar chart with 44 bars.
CI01000152_02427978_02434593 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location