Gene
RNA
| Item | Value |
|---|---|
| gene id | G359139 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000152 |
| NCBI id | null |
| chromosome length | 3381324 |
| location | 1108159 ~ 1108712 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU409644 | True | 529 | lncRNA | 0.38 | 2 | 1108159 | 1108712 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000152_01000620_01011373 | NA | coding | downstream | 96786 | 1000399 ~ 1011373 (-) |
| CI01000152_00998440_00998727 | NA | coding | downstream | 109312 | 998269 ~ 998847 (-) |
| CI01000152_00931110_00939265 | KIF5BB, KIF5B, KIF5BA | coding | downstream | 168894 | 931110 ~ 939265 (-) |
| CI01000152_00920046_00920561 | NA | coding | downstream | 187598 | 919226 ~ 920561 (-) |
| CI01000152_00906847_00916847 | NA | coding | downstream | 191312 | 906268 ~ 916847 (-) |
| CI01000152_01140574_01151786 | NA | coding | upstream | 31501 | 1140213 ~ 1152870 (-) |
| CI01000152_01241584_01266061 | KIRRELB | coding | upstream | 132438 | 1241150 ~ 1266061 (-) |
| CI01000152_01296980_01330911 | CADM3 | coding | upstream | 187978 | 1296690 ~ 1330911 (-) |
| CI01000152_01375796_01378931 | SDHC | coding | upstream | 266731 | 1375443 ~ 1380019 (-) |
| CI01000152_01380778_01397434 | ATP1A2A | coding | upstream | 271428 | 1380140 ~ 1397434 (-) |
| G359092 | NA | non-coding | downstream | 547 | 1053525 ~ 1107612 (-) |
| G359079 | NA | non-coding | downstream | 83909 | 1024050 ~ 1024250 (-) |
| G358803 | NA | non-coding | downstream | 486192 | 609912 ~ 621967 (-) |
| G358794 | NA | non-coding | downstream | 569411 | 530590 ~ 538748 (-) |
| G358955 | NA | non-coding | downstream | 598858 | 509064 ~ 509301 (-) |
| G359126 | NA | non-coding | upstream | 75534 | 1184246 ~ 1185333 (-) |
| G359124 | NA | non-coding | upstream | 178806 | 1287518 ~ 1290073 (-) |
| G359194 | NA | non-coding | upstream | 355366 | 1464078 ~ 1464328 (-) |
| G359198 | NA | non-coding | upstream | 357994 | 1466706 ~ 1467174 (-) |
| CI01000152_00562189_00571618 | CREMA | other | downstream | 542875 | 560484 ~ 572648 (-) |
| G359178 | NA | other | upstream | 228948 | 1337660 ~ 1344005 (-) |
| CI01000152_01892421_01893463 | CAMK2N2, CAMK2N1A | other | upstream | 782146 | 1890149 ~ 1893866 (-) |
| CI01000152_02015257_02024292 | CAPN10 | other | upstream | 912827 | 2015257 ~ 2024292 (-) |
| G359788 | NA | other | upstream | 1209556 | 2318268 ~ 2318734 (-) |
| G359800 | NA | other | upstream | 1260280 | 2368992 ~ 2459836 (-) |
