G359281


Basic Information

Item Value
gene id G359281
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 1671574 ~ 1672239 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU409823
AGGTTTATAATGGTTGTGAATGGGGGGGCCGCATTTTGAAGCCAAAAAAATTGCATCCATCCATAAAACAAGGGGGTTAATAAAGGCTTTCTGAAAGAAAGTGATGCATTTTTGTAAGAAAAATATCCATATTTAGAAATTACAAATTTTCAAATAACTAGCTTCCGGCGGAGGACCATACGCAGAATGCTCAAGTCGACTTGCGCCCAAATGAGTAATCCTCTGACGCGATGTATGACGCAGGATGAAGGAGTATTCTAAGCTTAAACGCCTCTCGCGGTTCAAACAAATAGGGCTGTGCAACAAATTTAAGCTCCTCTTCTCTTATATTGAAATCCTCCGACATTTCTCTATAAAAATGATTGTTTTAGACTTATAATCTGTGACCGGTGATTCGTTTTGCTCTATCCTCCTCGCAAACGCGTTCATCATTACGTTGTGCGTCAGGTCAAAGGATACTCTTCCATCGCAAATCGACATGCGCATTCTGCATACGGTCATCTCCCGGAAGCTAGTTATTTGAATTTATAACGTTTTAAATATGGATATTTTTTTTTTACTAAAAAAAATCACATTGCTTTGCTTCAGAAGGCCTTTATTAACCCCTTGGAGTCATATGGATTACTTTTTTTTATGGATGGATGCATTATTTTTGGCTTCAAAACA
>TU409821
AGGTTTATAATGGTTGTGAATGGGGGGGCCGCATTTTGAAGCCAAAAAAATTGCATCCATCCATAAAACAAGGGGGTTAATAAAGGCTTTCTGAAAGAAAGTGATGCATTTTTGTAAGAAAAATATCCATATTTAGAAATTACAAATTTTCAAATAACTAGCTTCCGGCGGAGGACCATACGCAGAATGCTCAAGTCGACTTGCGCCCAAATGAGTAATCCTCTGACGCGATGTATGACGCAGGATGAAGGAGTATTCTAAGCTTAAACGCCTCTCGCGGTTCAAACAAATAGGGCTGTGCAACAAATTTAAGCTCCTCTTCTCTTATATTGAAATCCTCCGACATTTCTCTATAAAAATGATTGTTTTAGACTTATAATCTGTGACCGGTGATTCGTTTTGCTCTATCCTCCTCGCAAACGCGTTCATCATTACGTTGTGCGTCAGGTCAAAGGATACTCTTCCATCGCAAATCGACATGCGCATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409823 False 666 lncRNA 0.38 1 1671574 1672239
TU409821 True 490 lncRNA 0.41 1 1671750 1672239

Neighbor

gene id symbol gene type direction distance location
CI01000152_01584481_01585153 NA coding downstream 86306 1583831 ~ 1585268 (-)
CI01000152_01567745_01570475 PIH1D3 coding downstream 101099 1567546 ~ 1570475 (-)
CI01000152_01557532_01565618 NA coding downstream 105956 1557225 ~ 1565618 (-)
CI01000152_01545763_01547190 NA coding downstream 124384 1545334 ~ 1547190 (-)
CI01000152_01429044_01451054 LIG1 coding downstream 220520 1428865 ~ 1451054 (-)
CI01000152_01755247_01760266 MAP6D1 coding upstream 82891 1755130 ~ 1760675 (-)
CI01000152_01763662_01769747 ACSM3 coding upstream 91050 1763289 ~ 1769747 (-)
CI01000152_01770267_01784486 NCAPD2 coding upstream 97852 1770091 ~ 1784486 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A coding upstream 219896 1890149 ~ 1893866 (-)
CI01000152_01905400_01907934 MUL1A coding upstream 231464 1903703 ~ 1907934 (-)
G359280 NA non-coding downstream 540 1669793 ~ 1671034 (-)
G359277 NA non-coding downstream 8125 1662140 ~ 1663449 (-)
G359255 NA non-coding downstream 14645 1656556 ~ 1656929 (-)
G359226 NA non-coding downstream 95610 1572120 ~ 1575964 (-)
G359289 NA non-coding upstream 16792 1689031 ~ 1689571 (-)
G359315 NA non-coding upstream 210738 1882977 ~ 1883380 (-)
G359318 NA non-coding upstream 211315 1883554 ~ 1883942 (-)
G359429 NA non-coding upstream 280773 1953012 ~ 1954853 (-)
G359178 NA other downstream 327569 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1106290 560484 ~ 572648 (-)
CI01000152_02015257_02024292 CAPN10 other upstream 349300 2015257 ~ 2024292 (-)
G359788 NA other upstream 646029 2318268 ~ 2318734 (-)
G359800 NA other upstream 696753 2368992 ~ 2459836 (-)

Expression


Co-expression Network