Gene
RNA
| Item | Value |
|---|---|
| gene id | G359289 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000152 |
| NCBI id | null |
| chromosome length | 3381324 |
| location | 1689031 ~ 1689571 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU409833 | True | 475 | lncRNA | 0.36 | 2 | 1689031 | 1689571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000152_01584481_01585153 | NA | coding | downstream | 103763 | 1583831 ~ 1585268 (-) |
| CI01000152_01567745_01570475 | PIH1D3 | coding | downstream | 118556 | 1567546 ~ 1570475 (-) |
| CI01000152_01557532_01565618 | NA | coding | downstream | 123413 | 1557225 ~ 1565618 (-) |
| CI01000152_01545763_01547190 | NA | coding | downstream | 141841 | 1545334 ~ 1547190 (-) |
| CI01000152_01429044_01451054 | LIG1 | coding | downstream | 237977 | 1428865 ~ 1451054 (-) |
| CI01000152_01755247_01760266 | MAP6D1 | coding | upstream | 65559 | 1755130 ~ 1760675 (-) |
| CI01000152_01763662_01769747 | ACSM3 | coding | upstream | 73718 | 1763289 ~ 1769747 (-) |
| CI01000152_01770267_01784486 | NCAPD2 | coding | upstream | 80520 | 1770091 ~ 1784486 (-) |
| CI01000152_01892421_01893463 | CAMK2N2, CAMK2N1A | coding | upstream | 202564 | 1890149 ~ 1893866 (-) |
| CI01000152_01905400_01907934 | MUL1A | coding | upstream | 214132 | 1903703 ~ 1907934 (-) |
| G359281 | NA | non-coding | downstream | 16792 | 1671574 ~ 1672239 (-) |
| G359280 | NA | non-coding | downstream | 17997 | 1669793 ~ 1671034 (-) |
| G359277 | NA | non-coding | downstream | 25582 | 1662140 ~ 1663449 (-) |
| G359255 | NA | non-coding | downstream | 32102 | 1656556 ~ 1656929 (-) |
| G359226 | NA | non-coding | downstream | 113067 | 1572120 ~ 1575964 (-) |
| G359315 | NA | non-coding | upstream | 193406 | 1882977 ~ 1883380 (-) |
| G359318 | NA | non-coding | upstream | 193983 | 1883554 ~ 1883942 (-) |
| G359429 | NA | non-coding | upstream | 263441 | 1953012 ~ 1954853 (-) |
| G359372 | NA | non-coding | upstream | 356811 | 2046382 ~ 2059154 (-) |
| G359178 | NA | other | downstream | 345026 | 1337660 ~ 1344005 (-) |
| CI01000152_00562189_00571618 | CREMA | other | downstream | 1123747 | 560484 ~ 572648 (-) |
| CI01000152_02015257_02024292 | CAPN10 | other | upstream | 331968 | 2015257 ~ 2024292 (-) |
| G359788 | NA | other | upstream | 628697 | 2318268 ~ 2318734 (-) |
| G359800 | NA | other | upstream | 679421 | 2368992 ~ 2459836 (-) |
