G359372


Basic Information

Item Value
gene id G359372
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2046382 ~ 2059154 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU409934
TTTGTTTTGCTTGTTCTGTCCAGTGGAATCAAATTGACACAGACTCACTTTCATAAGATGCATTTTAATAGAAGCTAAAAAACAACTGCATGAAACATTTTTTTCAAGATGTGTTAATAACAAATTAAGATGTGAGATATTTGTGATTAACAGTGCATGTTATGTTAGAACAATGTGTTAATTATCATTCTTATCAGGACATCAGATTACAGCAGATACAACAATTACAAATTTAATATACATACAGTCTCACTAAAGTCAAAGTTAAGATGAATTTTATTGTTAGTTTGAAATTATCCTATATTTTAAAGCTTTTTGTTTCTTTGTTTGTTCAGATTTCCTGATCAGAAATTCATCTTTGGCACTGGCATAGAAAAATACATCGTAACAGACAATATGGTTTGTCGTAACCTGATTCATTCACCACTCTTCCAGGGCTCAGTCTGCACTGATGCTTTATCCGAACTTTTGTCTATCATGAAACGGATCTGTACTCCAGGCGCAATGTCCAGTTTGGATTTGTACTGATAAATATAATAATTCTCATTATCATCCTGCATCATTTCAAACTTCACAGCATAGCTATATGTGTAATATTCATCATTTTTATTTTGTGAACTACTGTAAAACCCCACCCATGAGTAGGAGAAAGTATCTTTCCAGTCTGTGAAGGTCTTCTTGATATAAAGCCGTGCAGAAGCTTTACCGTCTTCAGCGAAGAGCTGCAGACCAGCATCATCAAGCTCCGGTCCATAAAAGAATTCTGGACCATTTAATGAGCGTTCAGGCTGAAGACTAGGATTCAGAGTGCTACAAACTGATGGTAATATTGTCACTACTTCATCGCTCTCCCAGGGTGTAGTTTGTGCTAAAACATTGTTATATTTTTTGTCCAGCAGAAAACGGATTTGAACTCCAGGAGCAATAGCCAAATTGAAATTGTACTGGTAAACATCATAATTGTGTGTGAAATGGTTTTCGGTCTTTGCAAACTTATCAGCATACTGATATGTGGAATAGCCATCATTTTTATCTTGTGAACTTTTGTAAAACCCAACCCATGAGGCGTAGTTTGTGCTAAAACATTGTTATATTTTTT
>TU409933
TTTGTTTTGCTTGTTCTGTCCAGTGGAATCAAATTGACACAGACTCACTTTCATAAGATGCATTTTAATAGAAGCTAAAAAACAACTGCATGAAACATTTTTTTCAAGATGTGTTAATAACAAATTAAGATGTGAGATATTTGTGATTAACAGTGCATGTTATGTTAGAACAATGTGTTAATTATCATTCTTATCAGGACATCAGATTACAGCAGATACAACAATTACAAATTTAATATACATACAGTCTCACTAAAGTCAAAGTTAAGATGAATTTTATTGTTAGTTTGAAATTATCCTATATTTTAAAGCTTTTTGTTTCTTTGTTTGTTCAGATTTCCTGATCAGAAATTCATCTTTGGCACTGGCATAGAAAAATACATCGTAACAGACAATATGGTTTGTCGTAACCTGATTCATTCACCACTCTTCCAGGGCTCAGTCTGCACTGATGCTTTATCCGAACTTTTGTCTATCATGAAACGGATCTGTACTCCAGGCGCAATGTCCAGTTTGGATTTGTACTGATAAATATAATAATTCTCATTATCATCCTGCATCATTTCAAACTTCACAGCATAGCTATATGTGTAATATTCATCATTTTTATTTTGTGAACTACTGTAAAACCCCACCCATGAGTAGGAGAAAGTATCTTTCCAGTCTGTGAAGGTCTTCTTGATATAAAGCCGTGCAGAAGCTTTACCGTCTTCAGCGAAGAGCTGCAGACCAGCATCATCAAGCTCCGGTCCATAAAAGAATTCTGGACCATTTAATGAGCGTTCAGGCTGAAGACTAGGATTCAGAGTGCTACAAACTGATGGTAATATTGTCACTACTTCATCGCTCTCCCAGGGTGTAGTTTGTGCTAAAACATTGTTATATTTTTTGTCCAGCAGAAAACGGATTTGAACTCCAGGAGCAATAGCCAAATTGAAATTGTACTGGTAAACATCATAATTGTGTGTGAAATGGTTTTCGGTCTTTGCAAACTTATCAGCATACTGATATGTGGAATAGCCATCATTTTTATCTTGTGAACTTTTGTAAAACCCAACCCATGAGTGGTCAAAAACATCCTTCCAGTTACTGAAGGTTTTTTTGATGTAGAGTCGAGCACAGGCTTTGCCATCTTCAGCGTAGAGCTGCAGACTAGCATCAAACCCCTTGATTGTAGTGGGGATCATTCCATTAGCTCCATCAAACTCTGGTCCATACCAAATGTAGGGATTAGTGAACTGAAAATCAAAAAGCGATGGGTACAATCGCAGTCGGGGTTGGAGACCAGCTTTCAGGGAGACAGAAGTATCTAAAGCCCCAGATGATTCATAAATAGTCAACTGTTTCCTGACCTCTGTATAAACGTCATTAGTATCACTGGAATAAGTATTTTGGCAAATTTCAGTGTGTACATATTTAGAGTTATCCATAATTTCAGCAGGTATCTCCCATATGAGTTTTGCGTTTCCTTCTGTAGTTGCCTTTAACTCTAGTTTAATTCCCTCATATGTATTACATTGTAAATAAGGTGAGCGTTTCTTTCGGCTGAAATGACTGTGTGTACAGTCAGTGCTGCTATATCCTGTCTTTGTCAAAAACTGACGGTATCTGTCATATTCTGTGTCTTGTGAATTACGTGTCATTGTGTAAATACCATAATTATTGTTCTGATCCAGAGTGCAGTTATAAGGGTCTCCGATCTGCAAGATCAGTGCAGGATCAATCTCATAAGTGTCAGAAGGATTAAAGTCATTCTTGTGAAGGTTATGTGATGTAATGAACACTCTGAGTATCCTTTTTGGCTTATTTTGTTCCATCGAGACAATGAGCCTGTCCATATTTCTTTGTGGGACATTGGTGTTTCTGTAATACCTCCGCACATAGGCCGGCAATGCTTTGGATCCAGGAGATTTTAAATTGCCAACCGAATAGTATCTCTGCAAAAAGCTCAATGAGGGGAGAATGCCCTCTTTATTTAAATACTGATGGAATCCAAAGTCGCCTCTATGTGGATCAAAATTTGAATCAAGGATGAGAATGTTGTTCTGATCAACATTCAGAACTTTTTGAGCAAACCAGAACAATAACTGGAGTCCATGACGTGGAGCAGACTTGGCATATGTAATGTCTTTCAGGTCATCAATATTGTTAAGTTTTTTCACAGAAGAGACGCTCGCCAAGAAGAGGCAGAAGAGCAGGAAGCAGAGTCTCATGGCACCCATGGCAAAACTCAGATTGAAGGTCCCCAGTGGAAGAGCCTCTGCATCTAACACGTCTCTTGGGTGTTTATTTATATAGGGGGGGCTGTACTTTACAGACAGTACAGGGTGTGTCCCTCAGTTGTGGTCATTGGTGCCGATTTATATTTCGGTGGGTGCCCACACTGCAAACCCAATGGCAACACACCTCAGCTGCCACAAAAGAATTACTATTTCCTTCCTCAAAAAAGGCTCACTTGAAATAGAGAATAATTCATGAAAAACTGAGCTATCTGAGTCTTTTGTGTGCTCACTTTTTAATGTTTAATGAACGTTTGCATGACATTAGAATAAATTTTGAAGGACACACTGTCAAAGAGATGAAGTCACACATGCAATACAAATCTTCAAGCTAAAGTTTTCTGCAGAGATCTGCTCTTTATGGTTTGACTCTCACTTGTATTTGTTTATTTTATATAAATTTATATTATATACAGCAAATCATATATTTTTAAAGTGTTATGTTTCTACAGGCCAAATATAAATTATTTAAAATAATCAGAATTAAATTTTTTCTAACCTTCCTAATTTCCACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409934 False 1099 lncRNA 0.35 2 2046382 2059154
TU409933 True 2795 lncRNA 0.37 2 2055831 2059154

Neighbor

gene id symbol gene type direction distance location
CI01000152_02015257_02024292 CAPN10 coding downstream 22090 2015257 ~ 2024292 (-)
CI01000152_02006897_02010593 EIF4E2 coding downstream 35789 2006352 ~ 2010593 (-)
CI01000152_01999033_01999195 NA coding downstream 47187 1998783 ~ 1999195 (-)
CI01000152_01917798_01946700 NA coding downstream 98318 1916703 ~ 1948064 (-)
CI01000152_01905400_01907934 MUL1A coding downstream 138448 1903703 ~ 1907934 (-)
CI01000152_02066678_02068178 NA coding upstream 7276 2066430 ~ 2068284 (-)
CI01000152_02086974_02089993 NA coding upstream 27334 2086488 ~ 2090050 (-)
CI01000152_02190690_02206511 NA coding upstream 131528 2190682 ~ 2206658 (-)
CI01000152_02334753_02345817 GPSM2 coding upstream 275014 2334168 ~ 2345817 (-)
CI01000152_02427978_02434593 NA coding upstream 368365 2427519 ~ 2434593 (-)
G359429 NA non-coding downstream 91529 1953012 ~ 1954853 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A non-coding downstream 152923 1890149 ~ 1893866 (-)
G359318 NA non-coding downstream 162440 1883554 ~ 1883942 (-)
G359315 NA non-coding downstream 163002 1882977 ~ 1883380 (-)
G359289 NA non-coding downstream 356811 1689031 ~ 1689571 (-)
G359709 NA non-coding upstream 101198 2160352 ~ 2175594 (-)
G359701 NA non-coding upstream 162774 2221928 ~ 2226863 (-)
G359737 NA non-coding upstream 191326 2250480 ~ 2252239 (-)
G359178 NA other downstream 702377 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1481098 560484 ~ 572648 (-)
G359788 NA other upstream 259114 2318268 ~ 2318734 (-)
G359800 NA other upstream 309838 2368992 ~ 2459836 (-)

Expression


Co-expression Network