XLOC_011686 (gstz1)


Basic Information

Item Value
gene id XLOC_011686
gene name gstz1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 45106424 ~ 45114519 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023191
AAAAGGAGGATCCACAATGCGCGGAGCATCGCTACAATACATCCTGTACTTTATGGATATTACAGAAGTTCTTGCTCCTGGAGAGTCCGGATAGCATTTGCATTGAAAGGCATTGAATATGAGCAAAAGCCGATAAATCTCATCAAGGATGGAGGGCAGCAGCTCACGGATCAGTTTAAGGCAATAAACCCAATGCAGCAAGTGCCAGCAGTGTCCATTGACGGCATCACCTTGTCTCAGTCTTTGGCCATCATCCAGTACATTGAGGAAACCCGTCCAGAGCCCCGCCTCCTGCCTGCAGACCCCATGCAGAGAGCTCATGTCCGCATCATCTGCGACATCATCGCCTCTGGGATCCAGCCTCTTCAAAATCTGTATGTGCTTCAGAAAATCGGAGAAGATAAGGTTCAGTGGGCTCAACATTTCATCAACCGAGGATTCCAGGCCCTGGAGCCTGTCCTGAAGGAGACAGCAGGAAAATACTGCGTGGGTGATGAGATCTCTATGGCAGATATTTGCCTCGTGCCTCAAGTCTACAATGCTGACAGGTTCAAGGTGGATATGACCCAGTATCCCACGATCAGAAGGTTAAATCAGACCTTGGTTGAGATCGAAGCCTTCAAGGCCAGTCACCCTTCACGTCAGCCTGATACTCCAGATGATCTGCGGCTGTAATTCTCTAGTGATCTGTAATTAAATCAGTAATAAAGCACTTTGAGAAGCA
>TCONS_00023192
ATGAGTGCAACAGTTGCACGTTTAATCAAGCCTGTACTTTATGGATATTACAGAAGTTCTTGCTCCTGGAGAGTCCGGATAGCATTTGCATTGAAAGGCATTGAATATGAGCAAAAGCCGATAAATCTCATCAAGGATGGAGGGCAGCAGCTCACGGATCAGTTTAAGGCAATAAACCCAATGCAGCAAGTGCCAGCAGTGTCCATTGACGGCATCACCTTGTCTCAGTCTTTGGCCATCATCCAGTACATTGAGGAAACCCGTCCAGAGCCCCGCCTCCTGCCTGCAGACCCCATGCAGAGAGCTCATGTCCGCATCATCTGCGACATCATCGCCTCTGGGATCCAGCCTCTTCAAAATCTGTATGTGCTTCAGAAAATCGGAGAAGATAAGGTTCAGTGGGCTCAACATTTCATCAACCGAGGATTCCAGGCCCTGGAGCCTGTCCTGAAGGAGACAGCAGGAAAATACTGCGTGGGTGATGAGATCTCTATGGCAGATATTTGCCTCGTGCCTCAAGTCTACAATGCTGACAGGTTCAAGGTGGATATGACCCAGTATCCCACGATCAGAAGGTTAAATCAGACCTTGGTTGAGATCGAAGCCTTCAAGGCCAGTCACCCTTCACGTCAGCCTGATACTCCAGATGATCTGCGGCTGTAATTCTCTAGTGATCTGTAATTAAATCAGTAATAAAGCACTTTGAGAAGCATTTGTTCCAGACTGTTCATTGAAAAGGTAAGACAAATCAGTTTCTTTTCGCAAAGTGCTGCATTTATTGCTTCGGTGAAAAGACTTGAGTTGCTTTTTTTGCAACTTTCAGACATCTAAGAACATGAGGTGAGCTGTACATGTCAGTGAGAAGAAAGTGGAAGTGCAACAGAAGTCAAACATACAAAGCAAAACGTGAACAAACGTGTAAAATACGTGCTAAAGCAGAGAAAAGATTTATTGCACAAAAATACATCAAGGCTCTAAACGTGCTAAATACAAATCTACATGTGTATCTGCAAGAGCGAGTGAAGGCTTTGCTTGCGTTAAAAGAAATTCATATAAAATAAGTAGCTGTAAATCAGCTGTTCGTGCTAAAACTGCAATaatgcaacatttaaaaatacttagtctaaaagtgctttacaatgtttttgtaacctatattcattttgaaaaataaaaaaaaaaaagtctctgatCCTAAACAGGAAGCTGAACTGTACATTTAACGGTGTCGTTATAAAATGTTCCTGAACAGTCTGACCCTCCAAACATCAGGATGGCACACTGGAGAGAGGGGCTGTTGGCATGACGCCGATCTCTGGCATCCCTCAGCTCTGAAGGCTTTGTAAAGCCCAGGCTGATCAGACTGTGCCCCGCGCGGGGCTTACAACAAAGAGATGGAGACACCAGTGATGTCCAGGAGCTGCT
>TCONS_00023193
TTTTGGTGTTCCATCTCATTGGTTGAACAACTTGAACTGTTATTTTCCGTGTGTACGTTCAGTACATACAGAACTGATATTTGAATAGCATGGCGGCACAAACTAAGCCTGTACTTTATGGATATTACAGAAGTTCTTGCTCCTGGAGAGTCCGGATAGCATTTGCATTGAAAGGCATTGAATATGAGCAAAAGCCGATAAATCTCATCAAGGATGGAGGGCAGCAGCTCACGGATCAGTTTAAGGCAATAAACCCAATGCAGCAAGTGCCAGCAGTGTCCATTGACGGCATCACCTTGTCTCAGTCTTTGGCCATCATCCAGTACATTGAGGAAACCCGTCCAGAGCCCCGCCTCCTGCCTGCAGACCCCATGCAGAGAGCTCATGTCCGCATCATCTGCGACATCATCGCCTCTGGGATCCAGCCTCTTCAAAATCTGTATGTGCTTCAGAAAATCGGAGAAGATAAGGTTCAGTGGGCTCAACATTTCATCAACCGAGGATTCCAGGCCCTGGAGCCTGTCCTGAAGGAGACAGCAGGAAAATACTGCGTGGGTGATGAGATCTCTATGGCAGATATTTGCCTCGTGCCTCAAGTCTACAATGCTGACAGGTTCAAGGTGGATATGACCCAGTATCCCACGATCAGAAGGTTAAATCAGACCTTGGTTGAGATCGAAGCCTTCAAGGCCAGTCACCCTTCACGTCAGCCTGATACTCCAGATGATCTGCGGCTGTAATTCTCTAGTGATCTGTAATTAAATCAGTAATAAAGCACTTTGAGAAGCATTTGTTCCAGACTGTTCATTGAAAAGGTAAGACAAATCAGTTTCTTTTCGCAAAGTGCTGCATTTATTGCTTCGGTGAAAAGACTTGAGTTGCTTTTTTTGCAACTTTCAGACATCTAAGAACATGAGGTGAGCTGTACATGTCAGTGAGAAGAAAGTGGAAGTGCAACAGAAGTCAAACATACAAAGCAAAACGTGAACAAACGTGTAAAATACGTGCTAAAGCAGAGAAAAGATTTATTGCACAAAAATACATCAAGGCTCTAAACGTGCTAAATACAAATCTACATGTGTATCTGCAAGAGCGAGTGAAGGCTTTGCTTGCGTTAAAAGAAATTCATATAAAATAAGTAGCTGTAAATCAGCTGTTCGTGCTAAAACTGCAATaatgcaacatttaaaaatacttagtctaaaagtgctttacaatgtttttgtaacctatattcattttgaaaaataaaaaaaaaaaagtctctgatCCTAAACAGGAAGCTGAACTGTACATTTAACGGTGTCGTTATAAAATGTTCCTGAACAGTCTGACCCTCCAAACATCAGGATGGCACACTGGAGAGAGGGGCTGTTGGCATGACGCCGATCTCTGGCATCCCTCAGCTCTGAAGGCTTTGTAAAGCCCAGGCTGATCAGACTGTGCCCCGCGCGGGGCTTACAACAAAGAGATGGAGACACCAGTGATGTCCAGGAGCTGCT

Function

symbol description
gstz1 Enables glutathione transferase activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to act upstream of or within tyrosine catabolic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrion. Is expressed in brain; gill; liver; and pleuroperitoneal region. Orthologous to human GSTZ1 (glutathione S-transferase zeta 1).

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0006749 glutathione metabolic process biological_process
GO:0006559 L-phenylalanine catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0004364 glutathione transferase activity molecular_function
GO:0003824 catalytic activity molecular_function
GO:0016034 maleylacetoacetate isomerase activity molecular_function

KEGG:

id description
ko00350 Tyrosine metabolism
ko00643 Styrene degradation

ZFIN:

id description
ZDB-GENE-040718-184 Enables glutathione transferase activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to act upstream of or within tyrosine catabolic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrion. Is expressed in brain; gill; liver; and pleuroperitoneal region. Orthologous to human GSTZ1 (glutathione S-transferase zeta 1).

Ensembl:

ensembl_id ENSDARG00000027984

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023191 False 724 mRNA 0.48 9 45106424 45113806
TCONS_00023192 False 1425 mRNA 0.44 9 45106526 45114519
TCONS_00023193 True 1502 mRNA 0.43 9 45106706 45114519

Neighbor

gene id symbol gene type direction distance location
XLOC_011685 coq6 coding upstream 76399 45009868 ~ 45030025 (+)
XLOC_011684 tmem63c coding upstream 182763 44780166 ~ 44923661 (+)
XLOC_011683 NA coding upstream 343014 44761624 ~ 44763410 (+)
XLOC_011682 cipca coding upstream 344844 44756247 ~ 44761580 (+)
XLOC_011681 pgfb coding upstream 353985 44697604 ~ 44752439 (+)
XLOC_011687 CU695222.2 coding downstream 63107 45177626 ~ 45180746 (+)
XLOC_011688 NA coding downstream 78661 45193180 ~ 45200541 (+)
XLOC_011689 ganc coding downstream 144740 45259259 ~ 45302962 (+)
XLOC_011690 capn3a coding downstream 191126 45305645 ~ 45346635 (+)
XLOC_011691 NA coding downstream 233504 45348023 ~ 45349995 (+)
XLOC_011678 NA non-coding upstream 713637 44382333 ~ 44392787 (+)
XLOC_011677 BX548045.2 non-coding upstream 814904 44291405 ~ 44291520 (+)
XLOC_011676 NA non-coding upstream 843605 44258051 ~ 44262819 (+)
XLOC_011675 NA non-coding upstream 850497 44249450 ~ 44255927 (+)
XLOC_011702 dre-mir-203a non-coding downstream 693634 45808153 ~ 45808248 (+)
XLOC_011704 NA non-coding downstream 1058160 46172679 ~ 46180237 (+)

Expression


Co-expression Network