G359701


Basic Information

Item Value
gene id G359701
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2221928 ~ 2226863 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU410288
CAGAGACAATAAGTAAGCCATTCAAATCTCTATAAAGTGTAACTGCTGTGGCTCTGTAAAAAAACTCTGTTTGATCAGTTTGGCATAGCAACGCTGACTCAAAGGCTGACAACCTGGATTTCCCATCATACCTGTGGCTGTCCGTGCTGGAGGTTTTGGAGACTCCATGATGTCTCTGTGCATAGATTTGGGGCGTGGCTTCTTTTGCTTCGCACCAGGGGGGCGGGGCTTAATGACACTGTCCATGTCATCCATCAGTTTGAGCTGCTTCTTCCTCATATATTCATTTCTTATAAACTCCCGTCTTGCCTTCTCCTCCTCCTTCTTCAGAAGTTCCTCTTCTGCTTTCATTCGTGCTGCTTCTTTCTTCTGTTCCATCTCGGCCTCCTGTTGCTGTTTCTTCATCTGCATCTCCTTCTCCCTCCGCAACCTTTTCTCCATCAGAGCTGCTTTCTTCTGTGCAATATCCTCCTCTCCCTGCAGGTCGTCCTTGTAGAAGAAGCCACAGCACATCTTCTGGTCTGGTCTAAATTCTGGTCCAGTCTCTGTTTCTCTGCTGCTCTCCAGATTATGCCCATCTAGAGGCTTCAGAATAGAGAGAGGAACCTCAATCAGATCCTTCTTCTCTTGTGACTCTTCTTCATTTATGTTCCCACTTGCTGTTTCCGTCGAACGGTCCATTGTTGGCTGAGACAGAACCTCAGATGTTGGCACATTCATGTTTCTATCATGCTTTGCTTCTTCCTGCTTTGCGTTCACCTGAGCAGACGGTGGATTTGCAGCTGCTTTTTGTGCATCCTCACTTGAAGGTCGCTCATCATGTCCCAAGTAGGCAAATGAGCTGGTCTGCATCTGGCTGGGCAAGAAACGTCTAAGTCGAGGCAGGCTGTCCACCGACTGCTGCGTGTTGAGCATGCGGCTGAAGGGCGTGACCTTCAGGTCAGTGGGCCTTGGCGTTCGTGGCGTCCTTGCATGGAAAGACGCAGACTTCCTTTTGATCGTCGAGGGCGAACGGTGTGATGTGCGTGGTGAGCCGGTGGATGACAAAATGGGGGAGAGCGACCCCACCGAACCTCGGCCCACTACACTGCTGCTGCGCAACTCACGCAGCTGTTTGCGTGGCGCCGGGTCCGGCGGCGGAATCACCCAACTCTGATGATCACGCATCTGCATGATACGTTCCTGCTGCTGTGCCAAACGCTGCATCTCTGACTGTAGGAAGTTCAGAGACGTGTTCAGGCGCTCGATGGATCGCGTGTACTCCGCCAAGTCCACCTCCACGGCTGCTTCCTCCAGGGGTGATTTTGGTGGTGCGCCGTCTGGTCGACATCTCTCAAGTCTGGAATTGGAGTCATTCGAATTCAAGGGTGTCTTTAGAGGTTCTGGGTCACTGATCTGTTTTTCCTGACCATCTGGGCCTTTACTGTCTCCCCCTAGTGGCGACACGACTCCTTTACGCCTAACCACGTTGAGGAAGGCAGTCCTGCCCATGCGCTGCCTGTGACGTGTGAAAGCCGCTTCGACTTTCTTCTTCTGTGCCTCAATCGCTCTGCGTTTCTCTTCCAGCTTCATCTTCAACTGCACCATCTCCGACGCCAACAGTTGCGAGGGATCACGAGGGGAGATGATGCGAGCAGGGCTGTGTGCGTCAGGAGTAATCGAGCGAACCGTCCCTGACGCTCCTGGGGTTGTGACGTTCAGCTCACCACTCTCAGGCGTGTTACCGCCACTACCGCTGCTGCGGCCATCACCGTGGTTTAGTTTACGAAATTTCTGTTCAGCGAAGCTGGTCATTCGAACCGCAGAACCCAACGAGGAGGCCATGCTGGTGGCCAGGGAACGCATTCCCAAAAGGCTTGGACACGGGCTGCCAGCCGTCTCCGGAAGTGGGCAGGAACGAGCCTCATGGTCCGGGTCCATGTCCGAGTAGTCCTTCAGGGATGAATCCTCATCCTGTCCATCCTGGATGTCCTCGGTACGGACATGGATTCCAGTGTCCATGTCAGTAGAGGTGGAATTCAGGTCCGCATCGTCTGCTCTGACCTTGGAAAGAGAGTCCTCGGAATCGTTTGAGTCAGTGGCGGAGTTGTGGGAAGATGGGTTGTGTAGGAAAAAGGTGCTATCCCCAGATGGGGGGTGCAAGCTGCTGTGGGGTTGTTCAGAGTCATGGATGATCTTCAGGGCTTCTTCTATACTAGGAGTATTGGGCTGAGGGTCGTACGGAGGGCTGAGGTTATCTGCTGACACACCATTTACTACCCAGTGTAGTTTCCCAGATGATGTCTGCTGATTTGTCTGTTGGATTTCTCATCATCCTCCTCATGTATTTTGCTGTGGGCGTTCCCATTAACGGGCTGGAATGAAAGGTTCCTCCGCATTCCTCGGGCTGCATGGTGGACTTTAAAACACAAACCTTCTGTGCTTGCTGATCGGTTCAGTCCACGTCTTGAAGATGAACTCGTGCTGTCATCAAGTGGAATCTCAAATGATATCCCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410288 True 2498 lncRNA 0.52 4 2221928 2226863

Neighbor

gene id symbol gene type direction distance location
CI01000152_02190690_02206511 NA coding downstream 15270 2190682 ~ 2206658 (-)
CI01000152_02086974_02089993 NA coding downstream 131878 2086488 ~ 2090050 (-)
CI01000152_02066678_02068178 NA coding downstream 153644 2066430 ~ 2068284 (-)
CI01000152_02015257_02024292 CAPN10 coding downstream 197636 2015257 ~ 2024292 (-)
CI01000152_02006897_02010593 EIF4E2 coding downstream 211335 2006352 ~ 2010593 (-)
CI01000152_02334753_02345817 GPSM2 coding upstream 107305 2334168 ~ 2345817 (-)
CI01000152_02427978_02434593 NA coding upstream 200656 2427519 ~ 2434593 (-)
CI01000152_02440117_02451100 NA coding upstream 213254 2440117 ~ 2451822 (-)
G359709 NA non-coding downstream 46334 2160352 ~ 2175594 (-)
G359372 NA non-coding downstream 162774 2046382 ~ 2059154 (-)
G359429 NA non-coding downstream 267075 1953012 ~ 1954853 (-)
G359737 NA non-coding upstream 23617 2250480 ~ 2252239 (-)
G359745 NA non-coding upstream 48980 2275843 ~ 2316256 (-)
G359791 NA non-coding upstream 102132 2328995 ~ 2329399 (-)
G359819 NA non-coding upstream 391179 2618042 ~ 2620499 (-)
G359911 NA non-coding upstream 410851 2637714 ~ 2643327 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A other downstream 328469 1890149 ~ 1893866 (-)
G359178 NA other downstream 877923 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1656644 560484 ~ 572648 (-)
G359788 NA other upstream 91405 2318268 ~ 2318734 (-)
G359800 NA other upstream 142129 2368992 ~ 2459836 (-)

Expression


Co-expression Network