G360074


Basic Information

Item Value
gene id G360074
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 3029318 ~ 3065869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU410708
CAAGAATGAGATGATGAAATGAAAGGCAATTACAAACGCTCAATACCTGTCTTTTCAATTATCTCAAGCAACAGTGCTAAACATGGCACCTATTATCTTCTGTTAAAATGAAGTGGTGAGTCTGATGTGCCTGGACAAAGTCTTACCAGTGAGCTGGTGTAGGTGGGGTCAGAGGTGTCTTCCTGCAGATAACGGGACAGGCCGAAGTCTGACACCTTGCACACGAGGTTGCTGTTCACCAGGATGTTACGGGCAGCCAGGTCTCGGTGGACGTAATTCATCTCCGACAGGTACTTCATCCCTGCGGCAATTCCCCTCAACATCCCCACCAGCTGGATCACCGTAAACTGCCCGTCGTTTTGCCTAAGGAAAGAGTCGAGCGCCCCGTTCTCCATGAACTCTGTGACGATCATGACTGGCCGGCTTTTGGTGACCACACCTTCAAGGCGAATGATGTTGGGGTGGTCAAACTGCCCCATGATTGATGCCTCAGACAGGAAGTCGCGTCTCTGCTTCTCAGAATAACCTGCCTTCAGTGTTTTGATGGCAACGTAGATCTCTCGTTTTCCAGGCAGTTTCAGTCGACCTTTATATACTTCCCCGAACTCACCTGCCCCAATAACTTCTTCAATCTTAACGGTGGAGACGTCTATCTCCTTGGCGAATTCCCTGACGGCTTCATTAGGATCTTCGTAGGTGAAGGGGTCGATGTAGATCTTCATCCCCGGAGAGCCTGGCAGGGTCGGGCAGCCCATGGGCGTGTGGCAGTTGGACAGATCTGGCCTCAAAGTGAGTTCTCTGCCAGTGCTGTAGTGCTGGAGTTTGTCACTATACACGGCCTCCTTATTGTAAGCTCGTTTCCTGCTACAGACTATAGATATGGCCACCAGAGACACGATGAAGACCACTCCAGCCGCGGCTGAGCCCGCAATCAGAGGCAACTGCTCCCTCAGCTCTGATTTATAGTCGTCATCTGTGAGGGTTTGGAAGCACATTTTGCTGCTGTATTTGCCGAAACCAGCAACAGTCCTGGCGCGGACCTGCATCACATACATGGTGCCTGGCCGTAATCCGTCCACACGAGCCGTGTTAGTCTGACTCCTCACCTGCGTGGAGTTTACCTCAGACAGCTCCT
>TU410707
TGTTAACAGGACTGACAAATCAAACTTTAAACTCACTCTGAAGTCATCTGGGTGACCAGCTGTAGGGATGTGAAGCCAGAGTTGAGGAAGTTGTCTCTGTACTGAGACATCTTGACGGCAGCCAGCCACTCCTCTACAGAACTAAAGGTGGTGAAGTCTGGGATAGACCTGTCCAACAACGGCTGGGACGGAATAGTAGGTATATTAGCGACTGCTTTAAGGCTAGTGGGGTTGCGGATGAGTTTGTCGAGCGTATTGACGATATCCGTGAAGCGCGGCCGAGCGTTCCGATCTTTCTGCCAACAGTCGAGCATCAGCTGGTGGAGAGCAGTGGGACAGTCCATGGGGGGCGGCAGCCTGTAATCCTGCTCTATGGCGTTGATCACATCTTGGTTGCTCATGTCCCAGTAGGGCCTCTCGCCAAAAGACATCACCTCCCACATGACGATACCGTAACTCCAGACGTCACTAGCAGAAGTAAACTTCCTGTATGCGATCGCTTCTGGCGAGGTCCATCTCACAGGGATCTTTCCACCCAGTGAGCTGGTGTAGGTGGGGTCAGAGGTGTCTTCCTGCAGATAACGGGACAGGCCGAAGTCTGACACCTTGCACACGAGGTTGCTGTTCACCAGGATGTTACGGGCAGCCAGGTCTCGGTGGACGTAATTCATCTCCGACAGGTACTTCATCCCTGCGGCAATTCCCCTCAACATCCCCACCAGCTGGATCACCGTAAACTGCCCGTCGTTTTGCTACCACACAACACAGATATCACATGACATTCACCAATATGTCAACGCTCAACCAAATGAGCTCTTGGTGTTTAGCTGTACACATATATTTGGTTCTATCTGGTGGCTACTGAAAAATTTAAGCATCTATTTCTGTTTCACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410708 False 1135 lncRNA 0.52 6 3029318 3050071
TU410707 True 895 lncRNA 0.51 4 3049567 3065869

Neighbor

gene id symbol gene type direction distance location
CI01000152_02440117_02451100 NA coding downstream 577496 2440117 ~ 2451822 (-)
CI01000152_02427978_02434593 NA coding downstream 594725 2427519 ~ 2434593 (-)
CI01000152_02334753_02345817 GPSM2 coding downstream 683501 2334168 ~ 2345817 (-)
CI01000152_02190690_02206511 NA coding downstream 822660 2190682 ~ 2206658 (-)
CI01000152_02086974_02089993 NA coding downstream 939268 2086488 ~ 2090050 (-)
G360070 NA non-coding downstream 10888 3018171 ~ 3018430 (-)
G360069 NA non-coding downstream 11428 3017616 ~ 3017890 (-)
G360068 NA non-coding downstream 11875 3017216 ~ 3017443 (-)
G360067 NA non-coding downstream 15031 3013893 ~ 3014287 (-)
G360059 NA non-coding downstream 32189 2996902 ~ 2997129 (-)
G360223 NA non-coding upstream 105958 3171827 ~ 3172051 (-)
G360332 NA non-coding upstream 286815 3352684 ~ 3356085 (-)
G359800 NA other downstream 569482 2368992 ~ 2459836 (-)
G359788 NA other downstream 710584 2318268 ~ 2318734 (-)
CI01000152_02015257_02024292 CAPN10 other downstream 1004480 2015257 ~ 2024292 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A other downstream 1135859 1890149 ~ 1893866 (-)
G359178 NA other downstream 1685313 1337660 ~ 1344005 (-)

Expression


Co-expression Network