XLOC_011696 (marc1)


Basic Information

Item Value
gene id XLOC_011696
gene name marc1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 45472608 ~ 45518523 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023206
ATTGGTTGTATCTTGTAAATTGATACTGCGCATCAGAGTGGAGTGAAAGTTCTTCAGTTCCCACAGACAGGTAATATTATCAAAAACATGGACCTCAAAGAAGCGTTTGCGACAATCTTTGACCAAAATCGGAAAGTCGCACTATACGCCGCAGGCACAACGGTTGCTGTGCTGGGACTCggtcttgtttttaaatacatGCGTCGGGAGGAAAAGTTAACTCGAGTGGGAGTTGTAACTAAGCTGCTGGTTCATCCGCTGAAGTCTGGGAAAGCAGTGTCAGTGGAGGCAGCAGAATGCCTGCGAATGGGGCTGAAATACGGCGAACTGCGTGATCGTCACTGGCTGGTAATCACCGAGGATGGCCACATGGTGACAGGCCGACAGCAGCCGCGTCTTGTGTTGGTGTCTTTGACCTGTGAGGGTGGACATGTGAGCCTCAATGGACCGCAGATGGAGGAGCTGAAGTTTCCTCTTAACAAGGCCAGCGATTTGGTTGTGGACTGCAGaGTCTTCAGTGTAGATGTCCAGGGCAGGGACTGTGGCGACAAGGTCTCTGAATGGCTCACTCGATTTCTGGAAGCAGACAAACCTGTTCGCCTGGTGCATTATGAACCCGATCTGAAGCCCCAGAGGCCTCATGAGAAAGAGCCCCTATTTCCTAAAGATGATGAGGTGGCCTACCCCGATGCTGCTCCGGTCATGCTCATGACTGAGGCCTCTGTTGGAGACCTGAACAGCCGACTGGACAAGGATCTTTCTGTCTTTCAGTTTCGGCCCAGTATTGTTGTCAGTGACTGTGAAGCCTTCACTGAGGACACATGGGATCATATTCGTATTGGAGAAGTGGAGTTGAAAAGAGTCATAGGCTGTGGACGatGCCTTTTTACCACTGTTGACCCTGAGACTGGAGTCTTCTCTCGGAAAGAACCGCTTGACACTCTCAAAACCTATCGAATGACTGACCCCAAGCAGAAAACCTCACCAATACTGGGACAGTATTACACCGTCAGGAAAACGGGTGTTCTTCATGTCGGTGAACCAGTTTATAAGATCACCTATTAAAACAGGCCAGACTGGATGCAATGCAGAATATTAAAATCTAATGATTACAAGCAGACAGGCCATCCTTTACATCAGTTCTAAACTAGATTTAATCAGTCATATTTTTCATCATTTTCATTGAGTAATTATAAGTAatgagtataaataaataaaactatatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatgggcaatttttgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacatactgtacatacatacatacatacatacaactattctgtctggttctcgaatctgattggctgatagccgtgatatatttaagtaatatcagcccccgtacagcctctttaccctttatgtattactccacccacatacagccagcaaaaagcagacactacagatctaaagtttaaaagatgaagagtacaaaagggtttttgagactccatgtttgattttgtttttatatacacaattatgctgtcaaactgttgtataaacgcaatattacactcgtagcagtgcgatatggctgtatatcggcactggtgggggcactaaggcactcggcctgcagcctcgtGCGAACGCATGCctctcaccagtgccgatatacagccatattgcactgctacgagtgtgatattgctcatatataaagatgattttgtaaaatgttcAGTGTTAGGATTGGAGTAGATCAAATGTCAGAGATTCCAAACCAAAGGGTTCAGCAAATGTGAATGTGAGCATTGCATCCAAAACaaactgcaacaacaacaaaaacatcattTATGCGGGATCCAAAAAATAGCTGATTTATTCGTTGTCACATGGGTGAGTTTATTAGTTTTCAGTGATGTGGCCAACAAGTTTTTATAGCAAGATGATGGGAATTCTGTGATTCTTGTGTTTTTGGATCTCTCAAATTTCAGAGTGAATTGTCAAATAGTAGTGCAGTGTAATACTAGATTCATGTACAATCACAAATCAACATCTTGGTTTAAATCTCCCagccccctcacacacacacacacacacacacacacacacacacatacgagcATCTGCAATTATTTAGTCAAATGCAAATATCATGATTAAATACTCCCAATATGACTTCATCAATCACACACCGATTTATTGAATAGGATTACTGATATTGTGATGCTAAAAAGAGATCATGCTTGCTGAACATAAAGCCTTTAGAAATCTAATCAGTATTGTTTTCATTCGGACAACATCCAGTAGATGGCGCTGTTTCTGTGGTTTGTGAATGGCTGTAGACGTTCATATTTACAGTGCATTATTGTACATACATAGTTGCTAAGCTAACCATGAAAGGAGCAGGAATGAGGTTTCAAATAATTATGAATTGTAACAATAcgattgatttttaattttttttgagagTGAACCTATAAATACCGGATTTtccaaataa
>TCONS_00023207
AAGTTCTTCAGTTCCCACAGACAGGTAATATTATCAAAAACATGGACCTCAAAGAAGCGTTTGCGACAATCTTTGACCAAAATCGGAAAGTCGCACTATACGCCGCAGGCACAACGGTTGCTGTGCTGGGACTCggtcttgtttttaaatacatGCGTCGGGAGGAAAAGTTAACTCGAGTGGGAGTTGTAACTAAGCTGCTGGTTCATCCGCTGAAGTCTGGGAAAGCAGTGTCAGTGGAGGCAGCAGAATGCCTGCGAATGGGGCTGAAATACGGCGAACTGCGTGATCGTCACTGGCTGGTAATCACCGAGGATGGCCACATGGTGACAGGCCGACAGCAGCCGCGTCTTGTGTTGGTGTCTTTGACCTGTGAGGGTGGACATGTGAGCCTCAATGGACCGCAGATGGAGGAGCTGAAGTTTCCTCTTAACAAGGCCAGCGATTTGGTTGTGGACTGCAGaGTCTTCAGTGTAGATGTCCAGGGCAGGGACTGTGGCGACAAGGTCTCTGAATGGCTCACTCGATTTCTGGAAGCAGACAAACCTGTTCGCCTGGTGCATTATGAACCCGATCTGAAGCCCCAGAGGCCTCATGAGAAAGAGCCCCTATTTCCTAAAGATGATGAGGTTTGATGGACAGTCTTGTCTTACGCTATTTTTTTGTAAAGTAATAGTATTGGaaaggttttatttatataaacccttgaatgtagttttttttaataggaatAACAGTTATGCACACAAAAATGatctttgctgcttgttcaaactacctaatTAAAATGAGTTGATAAA
>TCONS_00023208
ATGGACCTCAAAGAAGCGTTTGCGACAATCTTTGACCAAAATCGGAAAGTCGCACTATACGCCGCAGGCACAACGGTTGCTGTGCTGGGACTCggtcttgtttttaaatacatGCGTCGGGAGGAAAAGTTAACTCGAGTGGGAGTTGTAACTAAGCTGCTGGTTCATCCGCTGAAGTCTGGGAAAGCAGTGTCAGTGGAGGCAGCAGAATGCCTGCGAATGGGGCTGAAATACGGCGAACTGCGTGATCGTCACTGGCTGGTAATCACCGAGGATGGCCACATGGTGACAGGCCGACAGCAGCCGCGTCTTGTGTTGGTGTCTTTGACCTGTGAGGGTGGACATGTGAGCCTCAATGGACCGCAGATGGAGGAGCTGAAGTTTCCTCTTAACAAGGCCAGCGATTTGGTTGTGGACTGCAGaGTCTTCAGTGTAGATGTCCAGGGCAGGGACTGTGGCGACAAGGTCTCTGAATGGCTCACTCGATTTCTGGAAGCAGACAAACCTGTTCGCCTGGTGCATTATGAACCCGATCTGAAGCCCCAGAGGCCTCATGAGAAAGAGCCCCTATTTCCTAAAGATGATGAGGTGGCCTACCCCGATGCTGCTCCGGTCATGCTCATGACTGAGGCCTCTGTTGGAGACCTGAACAGCCGACTGGACAAGGATCTTTCTGTCTTTCAGTTTCGGCCCAGTATTGTTGTCAGTGACTGTGAAGCCTTCACTGAGGACACATGGGATCATATTCGTATTGGAGAAGTGGAGTTGAAAAGAGTCATAGGCTGTGGACGatGCCTTTTTACCACTGTTGACCCTGAGACTGGAGTCTTCTCTCGGAAAGAACCGCTTGACACTCTCAAAACCTATCGAATGACTGACCCCAAGCAGAAAACCTCACCAATACTGGGACAGTATTACACCGTCAGGAAAACGGGTGTTCTTCATGTCATCCCACCCATCACTTGCTGGAACTGTTTCTCTGCTATCAATGAGTAACATCTGGACCTCTTTTACTGACCACGATGCTCGCATTTCAGATGTCTTTTACTTGCTGTGGTATAGAAATAGTTTAGTCGTGTGAACCAACAGTACAGCAGTGGCTGCTGATGACTTTTCAAATATAGAGAGTTTGGTGTCTCGTGTTCCAAATCCAATGATGCTGGAAGTGATAAATATCTTGAACCTATCAGTGATCAGTAGTGTGTATCTGTTTTGGTTGTGGTGCAGCTCTCTGGAAACCTCACACAGACTTCACCCCACAAGATTAGGTACAGAACGCATTGAAAAAGCCTCTAAACACAAACTATACTGAACCGAAGGACACCATACCATTCAGAGTAAATGCGACTTAAAGGGCTCCTTTTTTACTTCTTTACTAGATATTAGACAAGTCTTTGGtgtcagaatgtgtctgtaaacagattttttaatcacagtttctttgcaaatcttgTATTGTGGACATGATTATAAACTTTACAATTGAGACCTGTTAAtacgtgcctgtcaatcaatttggtggccTGGGAAAACTGCACTGCTATGTGCTTTTGCGGTCAGCCTCAAATTTGCAGGGATtcagatcctattttaacgtcaggaaatatttaaaaagagattAATTGTGTGACTGTGAACCAATATGACCGTGAACTACGGTTGGGCGAAGTCGATcaatttggcatcatacgatATCTAACGTGAAACATctcgatggacgatggcatcgtcgtcatgtAAAAAAGTGGGGAGAGGGGGCAGTGGGTGTTTAACAGAGTGCGCACAACGTGCctaaagagcgaggagggatccggtggtgaggggtgagaagggtgcacaacttatttgaggaccaggagggagacgcgcaatttccgggagattatcactcatttgcgggcatctgggagtctctatgcatttgtgggagactcccagaacttccgggagacttgggatgtctgaatatcatgtttaacaactatagtgagatgtgaTCCAGCTGTACATTCATGATAAACTGTTctatgtgcactgctctctggagcttaGACGGAGGCATGtcagtgtgtgtggctgtgtgtgtgtgtagggtcacgtgatgtgcattttcagcggacggagggctgttcagaaatgctaggtgaaacacaGTGTTGATCATTTTCGTTCTGAAATGCCAGTTTAACACTAAGTCATATTAGTGTAAGCAGGGCCTAAGTATGTATTTTTCGTGAGAGGATCGGCGAtgtcggctcagcatcgtgttgtcgtGTTGTTTTGCATGATCGGAGTAGTTAGGAAAACAAAAAgcccaccccagtgacagctttgtACCTTTATTCTGAGAGTGAACTAATTTACTACAAAAGTTTCAAAACTGTTCTTACCTGTTTTGGGCATTTCCAAACCTGCCAAAGGGGTCTCCTGCTTTCCCGCCATCTCCAGTAAATATGTACAAATATCCGTCTAGACCAAACAGAATCTGCCCGCCATTATGGTTTGCTGCAGGCTCCTCAATCTCAAGAAGAACTCTAAGAAAGAATTAGGGAAGGTAATGATTAAAATTGACTGCTATTCCGAAATTATTGTTAATTAAGGATGGTtcatccaaaaactaaaatttaccCACTATTTACTCATCATAgaatgttttcaaacatttacCAAAGTCATAGTCAgatttattgtcaattcagccatatgtacaagacatatagagaatcaaaattgcgttactctcagacccaaggtgcctAACATTAATATAACAAAGTAgagttttaagaaaaagaaaatttacaa

Function

symbol description
marc1 Predicted to enable molybdenum ion binding activity; molybdopterin cofactor binding activity; and nitrate reductase activity. Predicted to be involved in nitrate metabolic process. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Is expressed in otic placode and otic vesicle. Orthologous to human MTARC1 (mitochondrial amidoxime reducing component 1) and MTARC2 (mitochondrial amidoxime reducing component 2).

GO:

id name namespace
GO:0042126 nitrate metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0043546 molybdopterin cofactor binding molecular_function
GO:0030151 molybdenum ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0003824 catalytic activity molecular_function
GO:0008940 nitrate reductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050327-95 Predicted to enable molybdenum ion binding activity; molybdopterin cofactor binding activity; and nitrate reductase activity. Predicted to be involved in nitrate metabolic process. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Is expressed in otic placode and otic vesicle. Orthologous to human MTARC1 (mitochondrial amidoxime reducing component 1) and MTARC2 (mitochondrial amidoxime reducing component 2).

Ensembl:

ensembl_id ENSDARG00000070487

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023206 False 2601 mRNA 0.40 7 45472608 45482742
TCONS_00023207 False 800 processed_transcript 0.46 3 45472654 45475249
TCONS_00023208 True 2805 mRNA 0.45 8 45472695 45518523

Neighbor

gene id symbol gene type direction distance location
XLOC_011695 kcnk3b coding upstream 13401 45454943 ~ 45459207 (+)
XLOC_011694 ezra coding upstream 20492 45413324 ~ 45452116 (+)
XLOC_011693 tagapa coding upstream 61438 45404758 ~ 45411170 (+)
XLOC_011692 nenf coding upstream 69647 45395846 ~ 45402961 (+)
XLOC_011691 NA coding upstream 122613 45348023 ~ 45349995 (+)
XLOC_011697 si:ch211-202f3.3 coding downstream 58803 45577326 ~ 45599190 (+)
XLOC_011698 si:ch211-202f3.4 coding downstream 84117 45602640 ~ 45621301 (+)
XLOC_011699 vcpkmt coding downstream 120724 45639247 ~ 45647054 (+)
XLOC_011700 zgc:162184 coding downstream 130313 45648836 ~ 45678386 (+)
XLOC_011701 aspg coding downstream 219469 45737992 ~ 45775010 (+)
XLOC_011688 NA non-coding upstream 272067 45193180 ~ 45200541 (+)
XLOC_011687 CU695222.2 non-coding upstream 291862 45177626 ~ 45180746 (+)
XLOC_011683 NA non-coding upstream 709198 44761624 ~ 44763410 (+)
XLOC_011678 NA non-coding upstream 1079821 44382333 ~ 44392787 (+)
XLOC_011702 dre-mir-203a non-coding downstream 289630 45808153 ~ 45808248 (+)
XLOC_011704 NA non-coding downstream 654156 46172679 ~ 46180237 (+)
XLOC_011706 NA non-coding downstream 937267 46455790 ~ 46464176 (+)
XLOC_011708 NA non-coding downstream 1224773 46743296 ~ 46825416 (+)
XLOC_011710 CU137681.6 non-coding downstream 1330726 46849249 ~ 46849346 (+)

Expression


Co-expression Network