XLOC_011706



Basic Information


Item Value
gene id XLOC_011706
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 46455790 ~ 46464176 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024763
ATGTATGTTCAGCGTTCCTGGCTCACTTTGTCAGTTTATGGTTCTCACGGTGTTCTGTGTCCTGTCAGGCTCTCGACTTTGAATCGCTGGTGATGAAGAAGAGCAACCTCCAGGCTTGAACAGCGGACAGGATGAGCGACGCGATGGCGACCGCGGTGATGAAGCTGCATGATGACTGTGGTCCCCATTCCTCAATGATGAAGCGCTGTTTCGACACGGTGATGTTCTCGTTCTGCCACATCCCCCGCGTGAAAAGCAGACATTTGCCCCGAAAATCCTCCGTGTTCTCCGACAGAGTTGTCAGACCAGGAGATGACATGGCAGAATAACTGATGGAAAGAGATGTCACCAACATCACAAAACCATTTTGATTGTGAAGGGTCCGGCTTTCAGTAATCAAGTGATTATGCTCAAATGAAGAGATTATGCAATGCACACCTGCAAGGAAAAAACAGCCCACTTCACTGAAGCAATACTGCCACTGTGTGTATggattttcaatttattttttactaaaatcATATAGGTATATTAGCAACTCATACCTCTGTGAGATCGTTTCTTCCACTAGATAGAAGATTTAAAAAGTTTCCAGGCCCATGGGTTTAAGGTCGTCACAGAtcaggtgatgtgaatgaggctAAGGATGggttataaataaatcaataaactcAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024763 True 675 lncRNA 0.45 4 46455790 46464176

Neighbor


gene id symbol gene type direction distance location
XLOC_011705 si:dkey-206p8.1 coding upstream 16538 46387086 ~ 46439252 (+)
XLOC_011704 NA coding upstream 275553 46172679 ~ 46180237 (+)
XLOC_011703 kif26ab coding upstream 466324 45815353 ~ 45989466 (+)
XLOC_011702 dre-mir-203a coding upstream 647542 45808153 ~ 45808248 (+)
XLOC_011701 aspg coding upstream 680780 45737992 ~ 45775010 (+)
XLOC_011707 pimr22 coding downstream 275517 46739693 ~ 46740881 (+)
XLOC_011708 NA coding downstream 279120 46743296 ~ 46825416 (+)
XLOC_011709 pimr14 coding downstream 354345 46818521 ~ 46820429 (+)
XLOC_011710 CU137681.6 coding downstream 385073 46849249 ~ 46849346 (+)
XLOC_011711 CU137681.1 coding downstream 386850 46851026 ~ 46854102 (+)
XLOC_011691 NA non-coding upstream 1105795 45348023 ~ 45349995 (+)
XLOC_011688 NA non-coding upstream 1255249 45193180 ~ 45200541 (+)
XLOC_011687 CU695222.2 non-coding upstream 1275044 45177626 ~ 45180746 (+)
XLOC_011713 CU137681.2 non-coding downstream 447714 46911890 ~ 46920595 (+)
XLOC_011716 NA non-coding downstream 656103 47120279 ~ 47122203 (+)

Expression



Co-expression Network