XLOC_011708



Basic Information


Item Value
gene id XLOC_011708
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 46743296 ~ 46825416 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024764
TAAAGACTGCCAAGGGTGTTAAGACATTCAGAATAACACTATTTCAGACTCAGAATATGGCCATGATTATACAATTATAAGTCACTGGAGCACAATTAActgtctttagaaatagaaatgacagaagcaaatacatatttatttttaccttcATAAGTATCCTTGCAATGACGTGAAAATGAGATCACAATGAAAAATGAGATTTTATGTCATATTATTAATCACATAAAATCATACAGCAGTCAACACTGAAATCCATACATAATACAATACGTTTGAATTAATCCCATTTctgtgatataaataataaacattctgaACAGAGAACTGTAACATTGAGCAAATACAGCAGAGATACAATAGAACTCACAATGTAGTCACTATCTATTAAAACCaagattggaaaaaaaagaacttgaatttatttattatacaaatttaacagcaaatgaccTGTTAAAAAGTCACAACATTACATTCAAATCAGCTTCTGTTACTTGCTGCTTTACTTTAATCACAGTTGCGTTGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024764 True 529 lncRNA 0.30 2 46743296 46825416

Neighbor


gene id symbol gene type direction distance location
XLOC_011707 pimr22 coding upstream 2415 46739693 ~ 46740881 (+)
XLOC_011706 NA coding upstream 279120 46455790 ~ 46464176 (+)
XLOC_011705 si:dkey-206p8.1 coding upstream 304044 46387086 ~ 46439252 (+)
XLOC_011704 NA coding upstream 563059 46172679 ~ 46180237 (+)
XLOC_011703 kif26ab coding upstream 753830 45815353 ~ 45989466 (+)
XLOC_011710 CU137681.6 coding downstream 23833 46849249 ~ 46849346 (+)
XLOC_011711 CU137681.1 coding downstream 25610 46851026 ~ 46854102 (+)
XLOC_011712 pimr27 coding downstream 38700 46864116 ~ 46866095 (+)
XLOC_011713 CU137681.2 coding downstream 86474 46911890 ~ 46920595 (+)
XLOC_011714 pimr26 coding downstream 109645 46935061 ~ 46936696 (+)
XLOC_011702 dre-mir-203a non-coding upstream 935048 45808153 ~ 45808248 (+)
XLOC_011691 NA non-coding upstream 1393301 45348023 ~ 45349995 (+)
XLOC_011688 NA non-coding upstream 1542755 45193180 ~ 45200541 (+)
XLOC_011716 NA non-coding downstream 294863 47120279 ~ 47122203 (+)
XLOC_011717 BX663528.2 non-coding downstream 372460 47197876 ~ 47197992 (+)

Expression



Co-expression Network